RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 NAT14Q8WUY8 206 aa15.03■□□□□ -0
LIG1-219ENST00000600055 TRIM44Q96DX7 344 aaPredicted RBP15.03■□□□□ -0
LIG1-219ENST00000600055 CCDC97Q96F63 343 aaPredicted RBP15.03■□□□□ -0
LIG1-219ENST00000600055 ASB8Q9H765 288 aa15.03■□□□□ -0
LIG1-219ENST00000600055 EIF2B3Q9NR50 452 aaKnown RBP15.03■□□□□ -0
LIG1-219ENST00000600055 EVA1BQ9NVM1 165 aa15.03■□□□□ -0
LIG1-219ENST00000600055 NLE1Q9NVX2 485 aaPredicted RBP15.03■□□□□ -0
LIG1-219ENST00000600055 NCKIPSDQ9NZQ3 722 aa15.03■□□□□ -0
LIG1-219ENST00000600055 SLC23A2Q9UGH3 650 aa15.03■□□□□ -0
LIG1-219ENST00000600055 RABGEF1Q9UJ41 708 aa15.03■□□□□ -0
LIG1-219ENST00000600055 APPL1Q9UKG1 709 aa15.03■□□□□ -0
LIG1-219ENST00000600055 SAR1BQ9Y6B6 198 aa15.03■□□□□ -0
LIG1-219ENST00000600055 TRBV23OR9-2A0A075B6M9 112 aa15.02■□□□□ -0
LIG1-219ENST00000600055 GOLGA6L10A0A0M3HER8 536 aa15.02■□□□□ -0
LIG1-219ENST00000600055 VEGFDO43915 354 aa15.02■□□□□ -0
LIG1-219ENST00000600055 OPA1O60313 960 aa15.02■□□□□ -0
LIG1-219ENST00000600055 EML2O95834 649 aa15.02■□□□□ -0
LIG1-219ENST00000600055 PRSS56P0CW18 603 aa15.02■□□□□ -0
LIG1-219ENST00000600055 MC4RP32245 332 aa15.02■□□□□ -0
LIG1-219ENST00000600055 HADHAP40939 763 aa15.02■□□□□ -0
LIG1-219ENST00000600055 FNTAP49354 379 aa15.02■□□□□ -0
LIG1-219ENST00000600055 CDKN1CP49918 316 aaPredicted RBP15.02■□□□□ -0
LIG1-219ENST00000600055 ARSDP51689 593 aa15.02■□□□□ -0
LIG1-219ENST00000600055 SESN2P58004 480 aaPredicted RBP15.02■□□□□ -0
LIG1-219ENST00000600055 INSM1Q01101 510 aaPredicted RBP15.02■□□□□ -0
LIG1-219ENST00000600055 NFATC2Q13469 925 aa15.02■□□□□ -0
LIG1-219ENST00000600055 LRP8Q14114 963 aa15.02■□□□□ -0
LIG1-219ENST00000600055 LDLRAP1Q5SW96 308 aa15.02■□□□□ -0
LIG1-219ENST00000600055 HES3Q5TGS1 186 aa15.02■□□□□ -0
LIG1-219ENST00000600055 ZNF547Q8IVP9 402 aa15.02■□□□□ -0
LIG1-219ENST00000600055 RASGEF1AQ8N9B8 481 aa15.02■□□□□ -0
LIG1-219ENST00000600055 DDHD1Q8NEL9 900 aa15.02■□□□□ -0
LIG1-219ENST00000600055 STYXQ8WUJ0 223 aa15.02■□□□□ -0
LIG1-219ENST00000600055 CCDC74AQ96AQ1 378 aa15.02■□□□□ -0
LIG1-219ENST00000600055 CDKN2AIPNLQ96HQ2 116 aa15.02■□□□□ -0
LIG1-219ENST00000600055 ZNF778Q96MU6 729 aa15.02■□□□□ -0
LIG1-219ENST00000600055 DDX47Q9H0S4 455 aaKnown RBP15.02■□□□□ -0
LIG1-219ENST00000600055 SMOXQ9NWM0 555 aa15.02■□□□□ -0
LIG1-219ENST00000600055 SLC2A6Q9UGQ3 507 aa15.02■□□□□ -0
LIG1-219ENST00000600055 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.01□□□□□ -0.01
LIG1-219ENST00000600055 OR51F1A6NGY5 319 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 GPR89AB7ZAQ6 455 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 KMOO15229 486 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 ECEL1O95672 775 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 GAS8O95995 478 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 GP1BAP07359 652 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 GPR89BP0CG08 455 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 TPSB2P20231 275 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 CTSCP53634 463 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 CRADDP78560 199 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 E2F1Q01094 437 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 GTF2H3Q13889 308 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 HLTFQ14527 1009 aaKnown RBP eCLIP15.01□□□□□ -0.01
LIG1-219ENST00000600055 KCNJ11Q14654 390 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 TPSAB1Q15661 275 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 C14orf28Q4W4Y0 310 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 ZRANB3Q5FWF4 1079 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 ANKRD22Q5VYY1 191 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 ZNF534Q76KX8 674 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 DET1Q7L5Y6 550 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 LRRTM4Q86VH4 590 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 NAGSQ8N159 534 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 MAPK15Q8TD08 544 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 TTC25Q96NG3 672 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 C19orf43Q9BQ61 176 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 CCDC3Q9BQI4 270 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 KLC4Q9NSK0 619 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 TBC1D29Q9UFV1 150 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 CRLS1Q9UJA2 301 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 DNAJC16Q9Y2G8 782 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 NEUROG3Q9Y4Z2 214 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 SLC30A1Q9Y6M5 507 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 RNF215Q9Y6U7 377 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 MYLKQ15746 1914 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 NCOR2Q9Y618 2525 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 BPTFQ12830 3046 aa15.01□□□□□ -0.01
LIG1-219ENST00000600055 HEATR9A2RTY3 570 aa15□□□□□ -0.01
LIG1-219ENST00000600055 FAM221BA6H8Z2 402 aa15□□□□□ -0.01
LIG1-219ENST00000600055 OR2AG2A6NM03 316 aa15□□□□□ -0.01
LIG1-219ENST00000600055 AGAP14A8MT82 685 aa15□□□□□ -0.01
LIG1-219ENST00000600055 H7C0S8 307 aa15□□□□□ -0.01
LIG1-219ENST00000600055 SNX2O60749 519 aa15□□□□□ -0.01
LIG1-219ENST00000600055 CDK4P11802 303 aa15□□□□□ -0.01
LIG1-219ENST00000600055 ZNF7P17097 686 aaPredicted RBP15□□□□□ -0.01
LIG1-219ENST00000600055 MSH3P20585 1137 aa15□□□□□ -0.01
LIG1-219ENST00000600055 ITGALP20701 1170 aa15□□□□□ -0.01
LIG1-219ENST00000600055 ADRA1DP25100 572 aa15□□□□□ -0.01
LIG1-219ENST00000600055 PSMA3P25788 255 aa15□□□□□ -0.01
LIG1-219ENST00000600055 AKT1P31749 480 aa15□□□□□ -0.01
LIG1-219ENST00000600055 B4GALNT1Q00973 533 aa15□□□□□ -0.01
LIG1-219ENST00000600055 INSCQ1MX18 579 aa15□□□□□ -0.01
LIG1-219ENST00000600055 SKIDA1Q1XH10 827 aa15□□□□□ -0.01
LIG1-219ENST00000600055 TSTD2Q5T7W7 516 aa15□□□□□ -0.01
LIG1-219ENST00000600055 TMEM220Q6QAJ8 160 aa15□□□□□ -0.01
LIG1-219ENST00000600055 SYT10Q6XYQ8 523 aa15□□□□□ -0.01
LIG1-219ENST00000600055 CCNI2Q6ZMN8 369 aaPredicted RBP15□□□□□ -0.01
LIG1-219ENST00000600055 SNX20Q7Z614 316 aa15□□□□□ -0.01
LIG1-219ENST00000600055 C11orf96Q7Z7L8 435 aa15□□□□□ -0.01
LIG1-219ENST00000600055 TMPRSS12Q86WS5 348 aa15□□□□□ -0.01
LIG1-219ENST00000600055 C17orf82Q86X59 251 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms