RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	RHBDD1	Q8TEB9	315 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	SAP25	Q8TEE9	199 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	STYX	Q8WUJ0	223 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	LRRC61	Q9BV99	259 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	FRMD8	Q9BZ67	464 aa	Predicted RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	IL22	Q9GZX6	179 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	OR2AG1	Q9H205	316 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	FAM96A	Q9H5X1	160 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	ASB8	Q9H765	288 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	UGT1A7	Q9HAW7	530 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	UGT1A10	Q9HAW8	530 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	UGT1A8	Q9HAW9	530 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	NLE1	Q9NVX2	485 aa	Predicted RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	SYBU	Q9NX95	663 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	SAMD15	Q9P1V8	674 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	SUFU	Q9UMX1	484 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	GPSM3	Q9Y4H4	160 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	OAS3	Q9Y6K5	1087 aa	Known RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	CACNA1A	O00555	2505 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	FLRT2	O43155	660 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	AQP9	O43315	295 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	PCDHGA12	O60330	932 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	SRP72	O76094	671 aa	Known RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	CD59	P13987	128 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	DGKA	P23743	735 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	HSD17B3	P37058	310 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	MAGEA6	P43360	314 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	NPY2R	P49146	381 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	PCID2	Q5JVF3	399 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	RNASEH2B	Q5TBB1	312 aa	Known RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	ZNF534	Q76KX8	674 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	TRMT10C	Q7L0Y3	403 aa	Known RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	GALNT13	Q8IUC8	556 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	EID2	Q8N6I1	236 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	DEFB124	Q8NES8	71 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	ZNF398	Q8TD17	642 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	COX14	Q96I36	57 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	TTC25	Q96NG3	672 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	CAMK1G	Q96NX5	476 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	PHACTR1	Q9C0D0	580 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	XAB2	Q9HCS7	855 aa	Known RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	ZNHIT2	Q9UHR6	403 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	ANAPC5	Q9UJX4	755 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	CNOT6	Q9ULM6	557 aa	Known RBP	19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	BTBD3	Q9Y2F9	522 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	PCDHGB2	Q9Y5G2	931 aa		19.92	■□□□□ 0.78
IRF3-221	ENST00000598808	AGPS	O00116	658 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	TNFRSF10C	O14798	259 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	CEACAM5	P06731	702 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	GRK6	P43250	576 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	PMS2	P54278	862 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	GTF2H3	Q13889	308 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	TSTD2	Q5T7W7	516 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	TAS2R42	Q7RTR8	314 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	RELL1	Q8IUW5	271 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	NAT8L	Q8N9F0	302 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	PTCD2	Q8WV60	388 aa	Known RBP	19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	SERPINB12	Q96P63	405 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	RANBP9	Q96S59	729 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	SLC32A1	Q9H598	525 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	SLC2A6	Q9UGQ3	507 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	PRKAB1	Q9Y478	270 aa		19.91	■□□□□ 0.78
IRF3-221	ENST00000598808	NEMP2	A6NFY4	417 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	MROH6	A6NGR9	719 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	GOLGA6L10	A6NI86	522 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	NUDT17	P0C025	328 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	ALPPL2	P10696	532 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	PRAME	P78395	509 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	CBX1	P83916	185 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	GABPB1	Q06547	395 aa	Predicted RBP	19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	MORF4L2	Q15014	288 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	ELOC	Q15369	112 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	DEFB133	Q30KQ1	61 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	CRTC3	Q6UUV7	619 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	MICALCL	Q6ZW33	695 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	NLRP9	Q7RTR0	991 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	OTUD6B	Q8N6M0	293 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	MCU	Q8NE86	351 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	OR6P1	Q8NGX9	317 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	TBATA	Q96M53	351 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	ZIM3	Q96PE6	472 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	VPS35	Q96QK1	796 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	RTKN	Q9BST9	563 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	CHRAC1	Q9NRG0	131 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	SLC17A4	Q9Y2C5	497 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	MAD1L1	Q9Y6D9	718 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	ASCC3	Q8N3C0	2202 aa	Known RBP	19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	ZNF106	Q9H2Y7	1883 aa	Known RBP	19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	LRP4	O75096	1905 aa		19.9	■□□□□ 0.78
IRF3-221	ENST00000598808	DCDC2B	A2VCK2	349 aa		19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	OR51F1	A6NGY5	319 aa		19.89	■□□□□ 0.77
IRF3-221	ENST00000598808		H3BQF6	201 aa		19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	GAPDHS	O14556	408 aa	Predicted RBP	19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	SYF2	O95926	243 aa	Known RBP	19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	ANXA6	P08133	673 aa		19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	CELA2B	P08218	269 aa	Predicted RBP	19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	MSH3	P20585	1137 aa		19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	ITGA8	P53708	1063 aa		19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	NFATC2	Q13469	925 aa		19.89	■□□□□ 0.77
IRF3-221	ENST00000598808	PEX6	Q13608	980 aa		19.89	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms