RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 TLR4O00206 839 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 PFDN6O15212 129 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 SH3BP5O60239 455 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 CBFA2T3O75081 653 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 KCNK5O95279 499 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 VAPBO95292 243 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 MDH1P40925 334 aaKnown RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 CSE1LP55060 971 aaKnown RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 NXPH1P58417 271 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 GNGT1P63211 74 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 IL9RQ01113 521 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 KIF26BQ2KJY2 2108 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 TMEM52BQ4KMG9 183 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 SETMARQ53H47 684 aaPredicted RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 PACS1Q6VY07 963 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 KIAA0408Q6ZU52 694 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 KANSL1Q7Z3B3 1105 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 GLT6D1Q7Z4J2 308 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 ABI3BPQ7Z7G0 1075 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 MFSD2AQ8NA29 543 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 OR13H1Q8NG92 308 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 HCAR2Q8TDS4 363 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 STYXQ8WUJ0 223 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 CENPTQ96BT3 561 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 ZNF641Q96N77 438 aaPredicted RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 FCRL3Q96P31 734 aaPredicted RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 TRIM56Q9BRZ2 755 aaKnown RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 PLAC1Q9HBJ0 212 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 RIMKLBQ9ULI2 386 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
IRF3-213ENST00000596765 UNC13CQ8NB66 2214 aa13.2□□□□□ -0.3
IRF3-213ENST00000596765 TMEM120BA0PK00 339 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 CCDC78A2IDD5 438 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 CXorf49A8MYA2 514 aaPredicted RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 ANKRD66B4E2M5 251 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 PRAMEF26H0Y7S4 382 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 PRPF4O43172 522 aaKnown RBP eCLIP13.19□□□□□ -0.39e-7■■□□□ 13.2
IRF3-213ENST00000596765 TSPAN6O43657 245 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 ZWINTO95229 277 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 PRLP01236 227 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 PDHA1P08559 390 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 ZNF883P0CG24 379 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 KRT4P19013 534 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 CSRP1P21291 193 aaKnown RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 HNRNPA2B1P22626 353 aaKnown RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 MMP12P39900 470 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 SLC18A1P54219 525 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 ATXN3P54252 364 aaPredicted RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 RPS21P63220 83 aaKnown RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 BNIP3Q12983 259 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 TEAD4Q15561 434 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 TAF1AQ15573 450 aaPredicted RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 CNGA3Q16281 694 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 N4BP2L1Q5TBK1 243 aaPredicted RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 KIAA1161Q6NSJ0 714 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 PSAPL1Q6NUJ1 521 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 STRA8Q7Z7C7 330 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 TAX1BP1Q86VP1 789 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 PELI3Q8N2H9 469 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 ANKRD42Q8N9B4 389 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 OR6P1Q8NGX9 317 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 ACMSDQ8TDX5 336 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 TRIB3Q96RU7 358 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 MBNL1Q9NR56 388 aaKnown RBP13.19□□□□□ -0.3
IRF3-213ENST00000596765 TM7SF3Q9NS93 570 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 TREX1Q9NSU2 369 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 ANGPTL2Q9UKU9 493 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 PCDHB9Q9Y5E1 797 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 WDFY3Q8IZQ1 3526 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 EPG5Q9HCE0 2579 aa13.19□□□□□ -0.3
IRF3-213ENST00000596765 DMXL2Q8TDJ6 3036 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 A0A1B0GTQ1 180 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 MROH6A6NGR9 719 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 COPEO14579 308 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 TM9SF1O15321 606 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 FZD6O60353 706 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 PIAS1O75925 651 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 PGLSO95336 258 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 CHN1P15882 459 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 LPOP22079 712 aaPredicted RBP13.18□□□□□ -0.3
IRF3-213ENST00000596765 IGFALSP35858 605 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 NUDT1P36639 197 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 POLD2P49005 469 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 POLR2LP62875 67 aaKnown RBP13.18□□□□□ -0.3
IRF3-213ENST00000596765 CCDC15Q0P6D6 951 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 TEDDM1Q5T9Z0 273 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 MROH9Q5TGP6 573 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 MRNIPQ6NTE8 343 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 NEPROQ6NW34 567 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 ESRP1Q6NXG1 681 aaKnown RBP13.18□□□□□ -0.3
IRF3-213ENST00000596765 SDCCAG8Q86SQ7 713 aaPredicted RBP13.18□□□□□ -0.3
IRF3-213ENST00000596765 C4orf33Q8N1A6 199 aa13.18□□□□□ -0.3
IRF3-213ENST00000596765 CBARPQ8N350 705 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms