RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 LVRNQ6Q4G3 990 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 HOOK3Q86VS8 718 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 DDHD1Q8NEL9 900 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 OR13J1Q8NGT2 312 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 CCL4L1Q8NHW4 92 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 BAHD1Q8TBE0 780 aaPredicted RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 GPBAR1Q8TDU6 330 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 HDAC10Q969S8 669 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 CNDP2Q96KP4 475 aaKnown RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 ZNF778Q96MU6 729 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 TTC25Q96NG3 672 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 SERPINB12Q96P63 405 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 KIFC1Q9BW19 673 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 GSDMCQ9BYG8 508 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 TRIM31Q9BZY9 425 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 ZCCHC2Q9C0B9 1178 aaKnown RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 SYBUQ9NX95 663 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 FTSJ1Q9UET6 329 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 PRKAB1Q9Y478 270 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 MRFAP1Q9Y605 127 aa14.2□□□□□ -0.14
LIG1-208ENST00000595758 ARID1BQ8NFD5 2236 aaPredicted RBP14.2□□□□□ -0.14
LIG1-208ENST00000595758 SPAARA0A1B0GVQ0 90 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 AGAP14A8MT82 685 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 EFCAB8A8MWE9 144 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 GRID2O43424 1007 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 RAD51CO43502 376 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 TNFSF14O43557 240 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 MSH3P20585 1137 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 AKT1P31749 480 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 CTBSQ01459 385 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 ACVR1Q04771 509 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 CACNG1Q06432 222 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 GTF2H3Q13889 308 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 LRP8Q14114 963 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 MORF4L2Q15014 288 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 ARMC3Q5W041 872 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 CASC4Q6P4E1 433 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 TAS2R42Q7RTR8 314 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 NXPE1Q8N323 547 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 MPP5Q8N3R9 675 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 MNS1Q8NEH6 495 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 OR6P1Q8NGX9 317 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 SNF8Q96H20 258 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 ERP44Q9BS26 406 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 MRM3Q9HC36 420 aaKnown RBP14.19□□□□□ -0.14
LIG1-208ENST00000595758 SAMD15Q9P1V8 674 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 SOX13Q9UN79 622 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 SNX24Q9Y343 169 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 PLEKHM1Q9Y4G2 1056 aa14.19□□□□□ -0.14
LIG1-208ENST00000595758 PCYT1BQ9Y5K3 369 aaPredicted RBP14.19□□□□□ -0.14
LIG1-208ENST00000595758 LRP4O75096 1905 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 MYLKQ15746 1914 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 MAGEB16A2A368 324 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 OR51F1A6NGY5 319 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 SMAPO00193 183 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 CHUKO15111 745 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 SEC31AO94979 1220 aaKnown RBP14.18□□□□□ -0.14
LIG1-208ENST00000595758 NMBRP28336 390 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 MAGEA3P43357 314 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 CDKN1CP49918 316 aaPredicted RBP14.18□□□□□ -0.14
LIG1-208ENST00000595758 PRAMEP78395 509 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 SIM1P81133 766 aaPredicted RBP14.18□□□□□ -0.14
LIG1-208ENST00000595758 PROX2Q3B8N5 592 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 PPM1JQ5JR12 505 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 ZCCHC8Q6NZY4 707 aaKnown RBP14.18□□□□□ -0.14
LIG1-208ENST00000595758 AFTPHQ6ULP2 937 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 CRTC3Q6UUV7 619 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 MICALCLQ6ZW33 695 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 CHST15Q7LFX5 561 aaPredicted RBP14.18□□□□□ -0.14
LIG1-208ENST00000595758 DGLUCYQ7Z3D6 616 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 GLRX5Q86SX6 157 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 LRRTM4Q86VH4 590 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 SERPINA9Q86WD7 417 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 NRROSQ86YC3 692 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 RASGEF1AQ8N9B8 481 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 FAM181AQ8N9Y4 354 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 FAM46DQ8NEK8 389 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 HEXDCQ8WVB3 486 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 GLMNQ92990 594 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.18□□□□□ -0.14
LIG1-208ENST00000595758 DCUN1D1Q96GG9 259 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 COPS8Q99627 209 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 TREX1Q9NSU2 369 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 ANAPC5Q9UJX4 755 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 GPR34Q9UPC5 381 aa14.18□□□□□ -0.14
LIG1-208ENST00000595758 GOLGA4Q13439 2230 aaKnown RBP14.17□□□□□ -0.14
LIG1-208ENST00000595758 TRBV5-4A0A0C4DH59 114 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 CFAP99D6REC4 459 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 NDC80O14777 642 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 KMOO15229 486 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 GOT2P00505 430 aaKnown RBP14.17□□□□□ -0.14
LIG1-208ENST00000595758 PRSS56P0CW18 603 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 RALBP11234 206 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 ACP5P13686 325 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 CKMT2P17540 419 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 AK4P27144 223 aaPredicted RBP14.17□□□□□ -0.14
LIG1-208ENST00000595758 ACTR1BP42025 376 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 RPL21P46778 160 aaKnown RBP14.17□□□□□ -0.14
LIG1-208ENST00000595758 ITGA8P53708 1063 aa14.17□□□□□ -0.14
LIG1-208ENST00000595758 ACTR1AP61163 376 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms