RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TLR1Q15399 786 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 CNGA3Q16281 694 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 RAB6CQ53S08 254 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 TRNP1Q6NT89 227 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 IRGCQ6NXR0 463 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 CLEC9AQ6UXN8 241 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 MRGPREQ86SM8 312 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 SRLQ86TD4 932 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 ZNF354CQ86Y25 554 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 RAB43Q86YS6 212 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 TMEM126BQ8IUX1 230 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 COG1Q8WTW3 980 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 NR4A3Q92570 626 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 NINJ1Q92982 152 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 SLC35C1Q96A29 364 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 ZNF501Q96CX3 271 aaPredicted RBP6.33□□□□□ -1.4
DNMT1-222ENST00000590619 CNDP1Q96KN2 507 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 IP6K3Q96PC2 410 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 AGAP2Q99490 1192 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 GTPBP4Q9BZE4 634 aaKnown RBP6.33□□□□□ -1.4
DNMT1-222ENST00000590619 RAB33BQ9H082 229 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 RAB6CQ9H0N0 254 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 LIME1Q9H400 295 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 PCMTD2Q9NV79 361 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 P4HTMQ9NXG6 502 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 KCTD5Q9NXV2 234 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 GOLGA6AQ9NYA3 693 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 ADAM21Q9UKJ8 722 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 NEU3Q9UQ49 428 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 DOCK4Q8N1I0 1966 aa6.33□□□□□ -1.4
DNMT1-222ENST00000590619 J3KR12 359 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 K7ELQ4 463 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 PEX12O00623 359 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 PMM2O15305 246 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 WIPF1O43516 503 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 LDB2O43679 373 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 LRIG2O94898 1065 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 LCA5LO95447 670 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ASMTLO95671 621 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 VIPP01282 170 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ATP1A1P05023 1023 aaKnown RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ESRRAP11474 423 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 KRT5P13647 590 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ACP5P13686 325 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 SLC2A4P14672 509 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 LHCGRP22888 699 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 SERPINA4P29622 427 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ADRA1BP35368 520 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 HADHAP40939 763 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 FMO5P49326 533 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 MEOX1P50221 254 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TUBB4BP68371 445 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 NRG1Q02297 640 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 BCL2L1Q07817 233 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TUBB2AQ13885 445 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 NCF4Q15080 339 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 CEBPEQ15744 281 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 GPR19Q15760 415 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 C3AR1Q16581 482 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 LONRF1Q17RB8 773 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 PLA2G4EQ3MJ16 856 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 FAAH2Q6GMR7 532 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 FAM198BQ6UWH4 519 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ADAMTSL4Q6UY14 1074 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 NLRP8Q86W28 1048 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 FAM131BQ86XD5 332 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TMEM151BQ8IW70 566 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 D2HGDHQ8N465 521 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TSEN2Q8NCE0 465 aaKnown RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 EHBP1Q8NDI1 1231 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 OR1N1Q8NGS0 311 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 CPT1BQ92523 772 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 UBXN4Q92575 508 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 SCAMP4Q969E2 229 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 CLIP3Q96DZ5 547 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 COX14Q96I36 57 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 PCMTD1Q96MG8 357 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 GBP5Q96PP8 586 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 MAP3K3Q99759 626 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TRIM56Q9BRZ2 755 aaKnown RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TUBB2BQ9BVA1 445 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ABCG8Q9H221 673 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 ATP13A3Q9H7F0 1226 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 SLC40A1Q9NP59 571 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TMEM51Q9NW97 253 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 CD84Q9UIB8 345 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 CNOT6Q9ULM6 557 aaKnown RBP6.32□□□□□ -1.4
DNMT1-222ENST00000590619 STAP1Q9ULZ2 295 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 BTRCQ9Y297 605 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 SIK3Q9Y2K2 1263 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 SPTBP11277 2137 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 AKAP6Q13023 2319 aa6.32□□□□□ -1.4
DNMT1-222ENST00000590619 TTC24A2A3L6 582 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-222ENST00000590619 ATMINO43313 823 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-222ENST00000590619 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
DNMT1-222ENST00000590619 IGHEP01854 428 aa6.31□□□□□ -1.4
DNMT1-222ENST00000590619 HEXAP06865 529 aa6.31□□□□□ -1.4
DNMT1-222ENST00000590619 INHBBP09529 407 aa6.31□□□□□ -1.4
DNMT1-222ENST00000590619 IGFBP2P18065 325 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms