RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 SPATA16Q9BXB7 569 aa14.38□□□□□ -0.11
RFX1-206ENST00000589760 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
RFX1-206ENST00000589760 CLPBQ9H078 707 aa14.38□□□□□ -0.11
RFX1-206ENST00000589760 NFKBIL1Q9UBC1 381 aaPredicted RBP14.38□□□□□ -0.11
RFX1-206ENST00000589760 PCDHGA1Q9Y5H4 931 aa14.38□□□□□ -0.11
RFX1-206ENST00000589760 INPP4BO15327 924 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 YY2O15391 372 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 PSMD3O43242 534 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 RFPL3O75679 317 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 METTL18O95568 372 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 ASMTLO95671 621 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 CEACAM5P06731 702 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 CDK4P11802 303 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 BPIP17213 487 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 ACP1P24666 158 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 ACADVLP49748 655 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 DUSP3P51452 185 aaPredicted RBP14.37□□□□□ -0.11
RFX1-206ENST00000589760 CCDC173Q0VFZ6 552 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 SNX1Q13596 522 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 CCDC157Q569K6 752 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 PDPK2PQ6A1A2 396 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 DRICH1Q6PGQ1 229 aaPredicted RBP14.37□□□□□ -0.11
RFX1-206ENST00000589760 LVRNQ6Q4G3 990 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 TRAM1L1Q8N609 369 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 COX14Q96I36 57 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 PLEKHG4BQ96PX9 1271 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 TBL1YQ9BQ87 522 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 APOL2Q9BQE5 337 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 ZSCAN5AQ9BUG6 496 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 CARS2Q9HA77 564 aaKnown RBP14.37□□□□□ -0.11
RFX1-206ENST00000589760 BPIFA1Q9NP55 256 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 ANGPTL2Q9UKU9 493 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 DRG1Q9Y295 367 aaKnown RBP14.37□□□□□ -0.11
RFX1-206ENST00000589760 SLC17A4Q9Y2C5 497 aa14.37□□□□□ -0.11
RFX1-206ENST00000589760 FADS2P1A8MWK0 482 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 EFSO43281 561 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 IFNB1P01574 187 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 IVLP07476 585 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 CELA2BP08218 269 aaPredicted RBP14.36□□□□□ -0.11
RFX1-206ENST00000589760 CKMT1AP12532 417 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 ILKQ13418 452 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 OLIG2Q13516 323 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 ZDHHC20Q5W0Z9 365 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 ALS2CLQ60I27 953 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 KCTD11Q693B1 232 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 DOK6Q6PKX4 331 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 RAB44Q7Z6P3 723 aaPredicted RBP14.36□□□□□ -0.11
RFX1-206ENST00000589760 RASGEF1CQ8N431 466 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 TTC30BQ8N4P2 665 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 CHCHD4Q8N4Q1 142 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 CCDC89Q8N998 374 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 BOCQ9BWV1 1114 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 TMEM168Q9H0V1 697 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 LRRC40Q9H9A6 602 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 ARNT2Q9HBZ2 717 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 HOMER3Q9NSC5 361 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.36□□□□□ -0.11
RFX1-206ENST00000589760 NCKIPSDQ9NZQ3 722 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 IL17CQ9P0M4 197 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 FEZ2Q9UHY8 353 aaPredicted RBP14.36□□□□□ -0.11
RFX1-206ENST00000589760 CNOT6Q9ULM6 557 aaKnown RBP14.36□□□□□ -0.11
RFX1-206ENST00000589760 SUFUQ9UMX1 484 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 PKP3Q9Y446 797 aa14.36□□□□□ -0.11
RFX1-206ENST00000589760 COL27A1Q8IZC6 1860 aaPredicted RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 C2orf81A6NN90 581 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 HYAL3O43820 417 aaPredicted RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 USP12O75317 370 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 TOP3BO95985 862 aaKnown RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 FUCA1P04066 466 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 ATP1A1P05023 1023 aaKnown RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 FDFT1P37268 417 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 SPAM1P38567 509 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 GNPDA1P46926 289 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 POLD2P49005 469 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 SHC2P98077 582 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 SPARCL1Q14515 664 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 TCEA2Q15560 299 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 TAF1AQ15573 450 aaPredicted RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 FOXR1Q6PIV2 292 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 TAF8Q7Z7C8 310 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 TRIM74Q86UV6 250 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 BRSK1Q8TDC3 778 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 GTPBP3Q969Y2 492 aaKnown RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 SCARF2Q96GP6 870 aaPredicted RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 SCNM1Q9BWG6 230 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 GSDMCQ9BYG8 508 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 SUDS3Q9H7L9 328 aaPredicted RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 TRNAU1APQ9NX07 287 aaKnown RBP14.35□□□□□ -0.11
RFX1-206ENST00000589760 VPS18Q9P253 973 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 PAK5Q9P286 719 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 TMEM98Q9Y2Y6 226 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 KIF26BQ2KJY2 2108 aa14.35□□□□□ -0.11
RFX1-206ENST00000589760 CDC14CA4D256 554 aa14.34□□□□□ -0.11
RFX1-206ENST00000589760 USP27XA6NNY8 438 aa14.34□□□□□ -0.11
RFX1-206ENST00000589760 ERI2A8K979 691 aaKnown RBP14.34□□□□□ -0.11
RFX1-206ENST00000589760 STX7O15400 261 aaKnown RBP14.34□□□□□ -0.11
RFX1-206ENST00000589760 PPFIA2O75334 1257 aa14.34□□□□□ -0.11
RFX1-206ENST00000589760 SLC25A14O95258 325 aaPredicted RBP14.34□□□□□ -0.11
RFX1-206ENST00000589760 CRTAMO95727 393 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms