RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FAM45AQ8TCE6 357 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 BTN2A2Q8WVV5 523 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 EDAQ92838 391 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 GLYATL1Q969I3 302 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 FAM136AQ96C01 138 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 VPS35Q96QK1 796 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 COPS8Q99627 209 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 C1QTNF2Q9BXJ5 285 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 BTBD1Q9H0C5 482 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 MBNL1Q9NR56 388 aaKnown RBP11.2□□□□□ -0.62
VMP1-207ENST00000588131 OGFRQ9NZT2 677 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 DLGAP2Q9P1A6 1054 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 GALPQ9UBC7 116 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 MBD1Q9UIS9 605 aaPredicted RBP11.2□□□□□ -0.62
VMP1-207ENST00000588131 CNOT6Q9ULM6 557 aaKnown RBP11.2□□□□□ -0.62
VMP1-207ENST00000588131 CORO1CQ9ULV4 474 aaPredicted RBP11.2□□□□□ -0.62
VMP1-207ENST00000588131 VPS9D1Q9Y2B5 631 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 VWA7Q9Y334 891 aa11.2□□□□□ -0.62
VMP1-207ENST00000588131 A0A096LPK6 155 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 TMEM120BA0PK00 339 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 IQCF5A8MTL0 148 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 C10orf142B7Z368 130 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 PRMT5O14744 637 aaPredicted RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 RHOBTB1O94844 696 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 WISP3O95389 354 aaPredicted RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 APBB3O95704 486 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 PAK4O96013 591 aaPredicted RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 MPOP05164 745 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 C2P06681 752 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 SLC35E2BP0CK96 405 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 STMN1P16949 149 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 ZNF7P17097 686 aaPredicted RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 RPS3P23396 243 aaKnown RBP eCLIP11.19□□□□□ -0.62
VMP1-207ENST00000588131 POLD2P49005 469 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 ATP1A2P50993 1020 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 GYS2P54840 703 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 ADARP55265 1226 aaKnown RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 RAB10P61026 200 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 POU4F1Q01851 419 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 IRF4Q15306 451 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 NEK5Q6P3R8 708 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 CDHR3Q6ZTQ4 885 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 TRIM74Q86UV6 250 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.19□□□□□ -0.62
VMP1-207ENST00000588131 PLD6Q8N2A8 252 aaKnown RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 CLDN19Q8N6F1 224 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 FRMD1Q8N878 549 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 DDHD1Q8NEL9 900 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 OR2T34Q8NGX1 318 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 GDAP1Q8TB36 358 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 MDM1Q8TC05 714 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 LKAAEAR1Q8TD35 194 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 ACMSDQ8TDX5 336 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 RLN3Q8WXF3 142 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 APOPT1Q96IL0 206 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 UHRF1Q96T88 793 aaPredicted RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 TTC1Q99614 292 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 SLC17A9Q9BYT1 436 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 SLC13A1Q9BZW2 595 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 VPS11Q9H270 941 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 C12orf65Q9H3J6 166 aaKnown RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 KDM4CQ9H3R0 1056 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 SGK2Q9HBY8 427 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 SSU72Q9NP77 194 aaKnown RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 KCNK9Q9NPC2 374 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 FZD3Q9NPG1 666 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 PCDHB1Q9Y5F3 818 aa11.19□□□□□ -0.62
VMP1-207ENST00000588131 OAS3Q9Y6K5 1087 aaKnown RBP11.19□□□□□ -0.62
VMP1-207ENST00000588131 K7ESF4 209 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 COPEO14579 308 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 PRPF4O43172 522 aaKnown RBP eCLIP11.18□□□□□ -0.62
VMP1-207ENST00000588131 DCXO43602 365 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 DNAJC6O75061 913 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 SEMA4FO95754 770 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 ESR1P03372 595 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 ITGB6P18564 788 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 AKT1P31749 480 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 RPA3P35244 121 aaPredicted RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 IGFALSP35858 605 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 PPARGP37231 505 aaPredicted RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 NSG1P42857 185 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 SLC12A2P55011 1212 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 SGCGQ13326 291 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 LRRC14Q15048 493 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 MAP7D1Q3KQU3 841 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 PNCKQ6P2M8 343 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 TMEM207Q6UWW9 146 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 ADAMTSL4Q6UY14 1074 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 RAPH1Q70E73 1250 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 DET1Q7L5Y6 550 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 CLEC14AQ86T13 490 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 TRIM69Q86WT6 500 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 PHYKPLQ8IUZ5 450 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 CNPY4Q8N129 248 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 FAM160A2Q8N612 972 aaPredicted RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 ANKRD42Q8N9B4 389 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 GIMAP7Q8NHV1 300 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 FAM76AQ8TAV0 307 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 FUBP1Q96AE4 644 aaKnown RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 CENPTQ96BT3 561 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms