RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PCDHGA8Q9Y5G5 932 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 CFAP47Q6ZTR5 3102 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 GLYATL1P3A0A0U1RQE8 302 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 PMS2P1A4D2B8 440 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 C2orf81A6NN90 581 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 KMOO15229 486 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 CDK14O94921 469 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 TNFSF15O95150 251 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 CPNE6O95741 557 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 CCKBRP32239 447 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 ADRA1AP35348 466 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 PPM1FP49593 454 aaPredicted RBP20.17■□□□□ 0.82
SS18-224ENST00000584083 ERVPABLB-1P60509 514 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 CCDC173Q0VFZ6 552 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 GTF2H3Q13889 308 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 INSCQ1MX18 579 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 PLA2G4EQ3MJ16 856 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 PHF19Q5T6S3 580 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 RAB11FIP2Q7L804 512 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 LRRTM4Q86VH4 590 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 LRRC8AQ8IWT6 810 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 FBXO39Q8N4B4 442 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 UBE2Q2Q8WVN8 375 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 TTC25Q96NG3 672 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 SLC46A1Q96NT5 459 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 TBL1YQ9BQ87 522 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 RDH14Q9HBH5 336 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 ASCL3Q9NQ33 180 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 LZTFL1Q9NQ48 299 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 KLC4Q9NSK0 619 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 RALYQ9UKM9 306 aaKnown RBP20.17■□□□□ 0.82
SS18-224ENST00000584083 TMPRSS11EQ9UL52 423 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 ARL5AQ9Y689 179 aa20.17■□□□□ 0.82
SS18-224ENST00000584083 AGRPO00253 132 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 CHUKO15111 745 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 NRDCO43847 1150 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A9O60656 530 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 PPFIA2O75334 1257 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 SLC2A4P14672 509 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A6P19224 532 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 LPOP22079 712 aaPredicted RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A1P22309 533 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A4P22310 534 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A3P35503 534 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A5P35504 534 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 ABCG1P45844 678 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 PCBP4P57723 403 aaKnown RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 TMEM115Q12893 351 aaPredicted RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 EIF3IQ13347 325 aaKnown RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 SPARCL1Q14515 664 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 PTPRCAPQ14761 206 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 NR1D2Q14995 579 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 RPS6KA1Q15418 735 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 TAF1AQ15573 450 aaPredicted RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 PARP6Q2NL67 630 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 KHDC1Q4VXA5 237 aaKnown RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 IYDQ6PHW0 289 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 SFRP1Q8N474 314 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 ZNF248Q8NDW4 579 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 SLC35B2Q8TB61 432 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 PRR11Q96HE9 360 aaPredicted RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 NAF1Q96HR8 494 aaKnown RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 SLC38A3Q99624 504 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 TMEM121Q9BTD3 319 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 STN1Q9H668 368 aaKnown RBP20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A7Q9HAW7 530 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A10Q9HAW8 530 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 UGT1A8Q9HAW9 530 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 KCNK4Q9NYG8 393 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 CHD6Q8TD26 2715 aa20.16■□□□□ 0.82
SS18-224ENST00000584083 PLD2O14939 933 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 ITPKBP27987 946 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 CD1CP29017 333 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 FASLGP48023 281 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 HHEXQ03014 270 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 ZFP36L1Q07352 338 aaKnown RBP20.15■□□□□ 0.82
SS18-224ENST00000584083 ITGA9Q13797 1035 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 NKAIN2Q5VXU1 208 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 IGF2-ASQ6U949 168 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 TMPRSS9Q7Z410 1059 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 ZNF761Q86XN6 746 aaPredicted RBP20.15■□□□□ 0.82
SS18-224ENST00000584083 TRAPPC5Q8IUR0 188 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 OR4K2Q8NGD2 314 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 DTX3LQ8TDB6 740 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 BRSK1Q8TDC3 778 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 ATG4AQ8WYN0 398 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 ALS2CR12Q96Q35 445 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 ZMYND15Q9H091 742 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 SEMA6CQ9H3T2 930 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 PRDM8Q9NQV8 689 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 SLC23A2Q9UGH3 650 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 DNAJC16Q9Y2G8 782 aa20.15■□□□□ 0.82
SS18-224ENST00000584083 ZNF106Q9H2Y7 1883 aaKnown RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 GPR39O43194 453 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 METTL18O95568 372 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 CRTAMO95727 393 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 JMJD7P0C870 316 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 F3P13726 295 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 ZNF7P17097 686 aaPredicted RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 CLCNKAP51800 687 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms