RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 DCDC2BA2VCK2 349 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PFDN6O15212 129 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ATP8B1O43520 1251 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 NDUFS3O75489 264 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 KRT37O76014 449 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PCCBP05166 539 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 IVLP07476 585 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 INHBAP08476 426 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 BCKDHBP21953 392 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HNRNPA2B1P22626 353 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CSE1LP55060 971 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 INPP5AQ14642 412 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RASA2Q15283 850 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LPAL2Q16609 132 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 GPRC6AQ5T6X5 926 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CNSTQ6PJW8 725 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 EPS8L3Q8TE67 593 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 GLYATL1Q969I3 302 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZNF180Q9UJW8 692 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 DMTF1Q9Y222 760 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 IKBKGQ9Y6K9 419 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ACACBO00763 2458 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TLDC2A0PJX2 215 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 AGPSO00116 658 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MAP3K13O43283 966 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SPRP35270 261 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PTGER3P43115 390 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SLCO1A2P46721 670 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CD151P48509 253 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SERPINB9P50453 376 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RPL6Q02878 288 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ITIH4Q14624 930 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LDLRAP1Q5SW96 308 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CEP85LQ5SZL2 805 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RNF187Q5TA31 235 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CROCCP2Q86T23 111 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZC3HC1Q86WB0 502 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 DEFB119Q8N690 84 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 DDHD1Q8NEL9 900 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LPGAT1Q92604 370 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 COX14Q96I36 57 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HIC2Q96JB3 615 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 BMFQ96LC9 184 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 COPS8Q99627 209 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RBBP8Q99708 897 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ORAI3Q9BRQ5 295 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RTKNQ9BST9 563 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TEX101Q9BY14 249 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 DUSP15Q9H1R2 295 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 FZD3Q9NPG1 666 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 EURLQ9NYK6 297 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TXNDC16Q9P2K2 825 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 GMEB2Q9UKD1 530 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 VPS9D1Q9Y2B5 631 aa16.19■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PLXND1Q9Y4D7 1925 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 IGLV3-16A0A075B6K0 115 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 A0A1W2PPC4 97 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PRAMEF26H0Y7S4 382 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 FPGTO14772 594 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 INPP4BO15327 924 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 OR1I1O60431 355 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CDH16O75309 829 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SLC25A14O95258 325 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HOXC4P09017 264 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZNF7P17097 686 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 AKT2P31751 481 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 IGFALSP35858 605 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ADARP55265 1226 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SPEM2Q0P670 501 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ILF2Q12905 390 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LGSNQ5TDP6 509 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HEXDCQ8WVB3 486 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 APOOQ9BUR5 198 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 BOCQ9BWV1 1114 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 P2RY12Q9H244 342 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RHOJQ9H4E5 214 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TRIM39Q9HCM9 518 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PSMC3IPQ9P2W1 217 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CRYL1Q9Y2S2 319 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MTO1Q9Y2Z2 717 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 EML5Q05BV3 1969 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ABCA7Q8IZY2 2146 aa16.18■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PLXNB3Q9ULL4 1909 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 BPTFQ12830 3046 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HMX2A2RU54 273 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 POM121BA6NF01 834 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SMIM23A6NLE4 172 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PRMT5O14744 637 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HRO43593 1189 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RPS3P23396 243 aaKnown RBP eCLIP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CNTFP26441 200 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CD27P26842 260 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 FMO4P31512 558 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 NSG1P42857 185 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ABCG1P45844 678 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CLDN2P57739 230 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CDK3Q00526 305 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 B4GALNT1Q00973 533 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms