RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SDK2Q58EX2 2172 aa20.69■□□□□ 0.9
CCDC42-203ENST00000581598 SETXQ7Z333 2677 aaKnown RBP20.68■□□□□ 0.9
CCDC42-203ENST00000581598 OR5K4A6NMS3 321 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 MTSS1O43312 755 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 GRID2O43424 1007 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 CCL4P13236 92 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 ACP5P13686 325 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 F3P13726 295 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 NOP2P46087 812 aaKnown RBP20.68■□□□□ 0.9
CCDC42-203ENST00000581598 DYNLT1P63172 113 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 HHEXQ03014 270 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 SPOCD1Q6ZMY3 1216 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 RCBTB1Q8NDN9 531 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 OR10G6Q8NH81 332 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 TFB1MQ8WVM0 346 aaKnown RBP20.68■□□□□ 0.9
CCDC42-203ENST00000581598 SLC38A3Q99624 504 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 SHOC2Q9UQ13 582 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 PRKAB1Q9Y478 270 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 ALG6Q9Y672 507 aa20.68■□□□□ 0.9
CCDC42-203ENST00000581598 KIR2DS5A0A0G2JLQ3 304 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 A0A0G2JNG1 304 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 KIR2DS3K7RE56 304 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 CHUKO15111 745 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 DUX1O43812 170 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 CST8O60676 142 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 SLC25A14O95258 325 aaPredicted RBP20.67■□□□□ 0.9
CCDC42-203ENST00000581598 MT-CYBP00156 380 aaPredicted RBP20.67■□□□□ 0.9
CCDC42-203ENST00000581598 FGF3P11487 239 aaPredicted RBP20.67■□□□□ 0.9
CCDC42-203ENST00000581598 ZNF8P17098 575 aaPredicted RBP20.67■□□□□ 0.9
CCDC42-203ENST00000581598 EPHA4P54764 986 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 KIR2DS5Q14953 304 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 PCSK7Q16549 785 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 KIAA1614Q5VZ46 1190 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 CCDC70Q6NSX1 233 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 WDR74Q6RFH5 385 aaPredicted RBP20.67■□□□□ 0.9
CCDC42-203ENST00000581598 KDELC2Q7Z4H8 507 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 SLC9B2Q86UD5 537 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 ZFAND4Q86XD8 727 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 LRRC57Q8N9N7 239 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 SPATA22Q8NHS9 363 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 GLYATL1Q969I3 302 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 DDA1Q9BW61 102 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 GPR63Q9BZJ6 419 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 EPB41L1Q9H4G0 881 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 KCNK6Q9Y257 313 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 PCDHB11Q9Y5F2 797 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 CAPN6Q9Y6Q1 641 aa20.67■□□□□ 0.9
CCDC42-203ENST00000581598 TRBV23OR9-2A0A075B6M9 112 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 LOC285095A0A1B0GVY8 99 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 GRID2IPA4D2P6 1211 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 EPOP01588 193 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 PIRTP0C851 137 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 TNNT1P13805 278 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 CSTF2P33240 577 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC42-203ENST00000581598 CD68P34810 354 aaPredicted RBP20.66■□□□□ 0.9
CCDC42-203ENST00000581598 WASHC5Q12768 1159 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 TFDP3Q5H9I0 405 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 FAM182AQ5T1J6 154 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 C11orf63Q6NUN7 778 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 XKR5Q6UX68 686 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 ADGRG6Q86SQ4 1221 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 PHYKPLQ8IUZ5 450 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 KATNAL2Q8IYT4 538 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 DTX3LQ8TDB6 740 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 SGF29Q96ES7 293 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 AHCYL2Q96HN2 611 aaKnown RBP20.66■□□□□ 0.9
CCDC42-203ENST00000581598 PLEKHG4BQ96PX9 1271 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 VAT1Q99536 393 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.66■□□□□ 0.9
CCDC42-203ENST00000581598 OR2AG1Q9H205 316 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 TRABDQ9H4I3 376 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 FAM153AQ9UHL3 310 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 ATMQ13315 3056 aa20.66■□□□□ 0.9
CCDC42-203ENST00000581598 hCG_1818297A0A087WSY0 165 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 B4E171 279 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 STMND1H3BQB6 276 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 AGRPO00253 132 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 VEGFDO43915 354 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 PECAM1P16284 738 aaPredicted RBP20.65■□□□□ 0.9
CCDC42-203ENST00000581598 BPIP17213 487 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 HMGCLP35914 325 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 TSPAN7P41732 249 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 MANEAQ5SRI9 462 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 ALS2CLQ60I27 953 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 KDELC1Q6UW63 502 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 B4GALNT4Q76KP1 1039 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 RCOR2Q8IZ40 523 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 P3H4Q92791 437 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 VPS35Q96QK1 796 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 UCK1Q9HA47 277 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 TMEM9Q9P0T7 183 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 SAE1Q9UBE0 346 aaPredicted RBP20.65■□□□□ 0.9
CCDC42-203ENST00000581598 CFAP46Q8IYW2 2715 aa20.65■□□□□ 0.9
CCDC42-203ENST00000581598 PRR19A6NJB7 356 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 HACD1B0YJ81 288 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 PMPCBO75439 489 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 ZRANB2O95218 330 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC42-203ENST00000581598 ITGB2P05107 769 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 MSNP26038 577 aaKnown RBP20.64■□□□□ 0.89
CCDC42-203ENST00000581598 ARSDP51689 593 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms