RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SCN8AQ9UQD0 1980 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 PLXNA2O75051 1894 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 OR51F1A6NGY5 319 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 H3BMM5 538 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 RIPK2O43353 540 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 DFNA5O60443 496 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 AP2A2O94973 939 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 SOD1P00441 154 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 SYPP08247 313 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 GSTM1P09488 218 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 ATP1B2P14415 290 aaPredicted RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 ARNTP27540 789 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 ADARP55265 1226 aaKnown RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 GSTM4Q03013 218 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 TCF15Q12870 199 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 PDE1CQ14123 709 aaPredicted RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 TYSND1Q2T9J0 566 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 TEDDM1Q5T9Z0 273 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 LGSNQ5TDP6 509 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 PEAR1Q5VY43 1037 aaPredicted RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 PSAPL1Q6NUJ1 521 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 IL27RAQ6UWB1 636 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 ENPP7Q6UWV6 458 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 MACC1Q6ZN28 852 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 CTAGE3PQ8IX95 158 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 MREGQ8N565 214 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 OXR1Q8N573 874 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 C2CD4AQ8NCU7 369 aaPredicted RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 OR56A4Q8NGH8 313 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 FUBP1Q96AE4 644 aaKnown RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 CPNE1Q99829 537 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 TRIM56Q9BRZ2 755 aaKnown RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 ZDHHC5Q9C0B5 715 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 ARFGAP3Q9NP61 516 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 GMEB2Q9UKD1 530 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 CORO1CQ9ULV4 474 aaPredicted RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 GPR34Q9UPC5 381 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 PCDHB1Q9Y5F3 818 aa14.14□□□□□ -0.15
SKA2-205ENST00000580541 DNMT3AQ9Y6K1 912 aaPredicted RBP14.14□□□□□ -0.15
SKA2-205ENST00000580541 ZNF106Q9H2Y7 1883 aaKnown RBP14.13□□□□□ -0.15
SKA2-205ENST00000580541 SPTY2D1-AS1A0A0U1RR47 76 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 A0A1W2PR77 199 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 FAM159BA6NKW6 160 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 GOLGA8KD6RF30 607 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 GOLGA8TH3BQL2 631 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 PRMT5O14744 637 aaPredicted RBP14.13□□□□□ -0.15
SKA2-205ENST00000580541 KCNJ13O60928 360 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 EPN2O95208 641 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 TNFP01375 233 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 IVLP07476 585 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 RETP07949 1114 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 OR56A5P0C7T3 313 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 PI4KAP42356 2102 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 LEPRP48357 1165 aaKnown RBP14.13□□□□□ -0.15
SKA2-205ENST00000580541 CSNK1EP49674 416 aaKnown RBP14.13□□□□□ -0.15
SKA2-205ENST00000580541 SLC29A2Q14542 456 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 TRMT10BQ6PF06 316 aaKnown RBP14.13□□□□□ -0.15
SKA2-205ENST00000580541 PACS1Q6VY07 963 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 TAOK1Q7L7X3 1001 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 PIANPQ8IYJ0 282 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 PRSS33Q8NF86 280 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 OR13H1Q8NG92 308 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 NUSAP1Q9BXS6 441 aaKnown RBP14.13□□□□□ -0.15
SKA2-205ENST00000580541 ACSS3Q9H6R3 686 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 ERVMER34-1Q9H9K5 563 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 KLQ9UEF7 1012 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 RABGEF1Q9UJ41 708 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 GNPTGQ9UJJ9 305 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 SLC6A14Q9UN76 642 aa14.13□□□□□ -0.15
SKA2-205ENST00000580541 SMG5Q9UPR3 1016 aaKnown RBP14.13□□□□□ -0.15
SKA2-205ENST00000580541 CACNA1HO95180 2353 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 IGLV3-16A0A075B6K0 115 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 UBA6A0AVT1 1052 aaPredicted RBP14.12□□□□□ -0.15
SKA2-205ENST00000580541 H0Y8X5 98 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 H3BM21 787 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 KPNA5O15131 536 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 S1PR4O95977 384 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 ESR1P03372 595 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 INHBAP08476 426 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 VCLP18206 1134 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 RPS3P23396 243 aaKnown RBP eCLIP14.12□□□□□ -0.15
SKA2-205ENST00000580541 SPRP35270 261 aaPredicted RBP14.12□□□□□ -0.15
SKA2-205ENST00000580541 MSH2P43246 934 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 CDKN1CP49918 316 aaPredicted RBP14.12□□□□□ -0.15
SKA2-205ENST00000580541 CSE1LP55060 971 aaKnown RBP14.12□□□□□ -0.15
SKA2-205ENST00000580541 PPARDQ03181 441 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 CTBP1Q13363 440 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 DBN1Q16643 649 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 KBTBD12Q3ZCT8 623 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 GRTP1Q5TC63 336 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 PTRHD1Q6GMV3 140 aaKnown RBP14.12□□□□□ -0.15
SKA2-205ENST00000580541 STRA8Q7Z7C7 330 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 ADGRG6Q86SQ4 1221 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 CROCCP2Q86T23 111 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 PARGQ86W56 976 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 PPM1NQ8N819 430 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 PANX3Q96QZ0 392 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 LGR4Q9BXB1 951 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 SLC13A1Q9BZW2 595 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 OR2AG1Q9H205 316 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms