RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 GRK4P32298 578 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 RFX3P48380 749 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 HERVK_113P63132 956 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 OGFRL1Q5TC84 451 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 PIK3C3Q8NEB9 887 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 STYXQ8WUJ0 223 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 ERVK-6Q9BXR3 956 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 GMIPQ9P107 970 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 KLHL20Q9Y2M5 609 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 KCTD3Q9Y597 815 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 RGS10O43665 173 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 UROSP10746 265 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 IL12RB1P42701 662 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 GNPDA1P46926 289 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 ST8SIA6P61647 398 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 RPS7P62081 194 aaKnown RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 TPGS1Q6ZTW0 290 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 KBTBD6Q86V97 674 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 MON1AQ86VX9 555 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 OR52J3Q8NH60 311 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 TMEM159Q96B96 161 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 ISOC1Q96CN7 298 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 OMA1Q96E52 524 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 TDRD1Q9BXT4 1180 aaKnown RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 SNX6Q9UNH7 406 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 SDHDO14521 159 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 LSM1O15116 133 aaKnown RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 DENND5AQ6IQ26 1287 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 KLHL17Q6TDP4 642 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 GPC2Q8N158 579 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 CENPIQ92674 756 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 FCRL5Q96RD9 977 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 PHRF1Q9P1Y6 1649 aaKnown RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 CCDC162PA2VCL2 907 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 CYP7B1O75881 506 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 IMPDH2P12268 514 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 SLC10A7Q0GE19 358 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 INCA1Q0VD86 236 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 TRIM32Q13049 653 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 PTPRCAPQ14761 206 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 INTS11Q5TA45 600 aaKnown RBP13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 LINGO4Q6UY18 593 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 TRPV3Q8NET8 790 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 OR7D4Q8NG98 312 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 GALPQ9UBC7 116 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 DYRK1BQ9Y463 629 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 PTGDR2Q9Y5Y4 395 aa13.49□□□□□ -0.25
TRAPPC8-207ENST00000580104 SLC28A1O00337 649 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 NBNO60934 754 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 RPL26P61254 145 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 ZNF284Q2VY69 593 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 DUSP28Q4G0W2 176 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 GPR142Q7Z601 462 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 MYDGFQ969H8 173 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 TMBIM1Q969X1 311 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 LRTM1Q9HBL6 345 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 ITGB1BP2Q9UKP3 347 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 SLC7A4O43246 635 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 TBX1O43435 398 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CCNKO75909 580 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 ALOX5P09917 674 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 SLC26A3P40879 764 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 GK3PQ14409 553 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CTC1Q2NKJ3 1217 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 SLC2A7Q6PXP3 512 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 LUZP2Q86TE4 346 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 KBTBD8Q8NFY9 601 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 ITCHQ96J02 903 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 DHRS4Q9BTZ2 278 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 C8orf4Q9NR00 106 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 MKS1Q9NXB0 559 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 EBF1Q9UH73 591 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 UFM1P61960 85 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 SPIBQ01892 262 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 ILF2Q12905 390 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 TAF10Q12962 218 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CYP4Z1Q86W10 505 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 RTL3Q8N8U3 475 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CHCHD6Q9BRQ6 235 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 CD320Q9NPF0 282 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 GNPTGQ9UJJ9 305 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 LOC110117498-PIK3R3F6TDL0 507 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 H7C4K7 107 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 PRKACGP22612 351 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 ITPKAP23677 461 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 AZGP1P25311 298 aaKnown RBP13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 TP53BP2Q13625 1128 aa13.48□□□□□ -0.25
TRAPPC8-207ENST00000580104 HNRNPDQ14103 355 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms