RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 NADK2Q4G0N4 442 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CT47A1Q5JQC4 288 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TMCO3Q6UWJ1 677 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MCOLN2Q8IZK6 566 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SLC34A3Q8N130 599 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PGBD5Q8N414 524 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ATPAF2Q8N5M1 289 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CT55Q8WUE5 264 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 KLHL6Q8WZ60 621 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PLEKHG4BQ96PX9 1271 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 AGAP2Q99490 1192 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 AGPAT1Q99943 283 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TRIM55Q9BYV6 548 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 POLR1EQ9GZS1 481 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ING2Q9H160 280 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CWC15Q9P013 229 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 EPHA6Q9UF33 1036 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PCSK1NQ9UHG2 260 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RARRES3Q9UL19 164 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PRKAB1Q9Y478 270 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 HIVEP1P15822 2718 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 H3BRJ5 948 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FZD6O60353 706 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MAFKO60675 156 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MTA2O94776 668 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PDHA1P08559 390 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RNF224P0DH78 156 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TYRP1P17643 537 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NELFEP18615 380 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TNFAIP3P21580 790 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PTPN4P29074 926 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CAPZBP47756 277 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CCL11P51671 97 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MAXP61244 160 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RPL26P61254 145 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 OGDHQ02218 1023 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 BECN1Q14457 450 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CACHD1Q5VU97 1274 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ACAD10Q6JQN1 1059 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 JMJD6Q6NYC1 403 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RFLNAQ6ZTI6 216 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RHOT1Q8IXI2 618 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 UBXN4Q92575 508 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ELMO2Q96JJ3 720 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RAB33BQ9H082 229 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FAM83DQ9H4H8 585 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SAMSN1Q9NSI8 373 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 POT1Q9NUX5 634 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 OGFRQ9NZT2 677 aa12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RPL26L1Q9UNX3 145 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SSU72P8A0A1W2PR75 194 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LDLRP01130 860 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LPOP22079 712 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 COL8A1P27658 744 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MIPP30301 263 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SLC19A1P41440 591 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 RIPPLY3P57055 190 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ACY1Q03154 408 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MAMLD1Q13495 774 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TUBB3Q13509 450 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PTPRRQ15256 657 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 HENMT1Q5T8I9 393 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PLEKHA7Q6IQ23 1121 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SIDT2Q8NBJ9 832 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CCHCR1Q8TD31 782 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PNPLA2Q96AD5 504 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 C5orf34Q96MH7 638 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LYSMD1Q96S90 227 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PEBP4Q96S96 227 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 OSGEPL1Q9H4B0 414 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TAB2Q9NYJ8 693 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PKD2L2Q9NZM6 624 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MAP10Q9P2G4 905 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 AMACRQ9UHK6 382 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CNOT6Q9ULM6 557 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 FARSAQ9Y285 508 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SLC5A6Q9Y289 635 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SLC30A1Q9Y6M5 507 aa12.02□□□□□ -0.49
CDK5RAP3-216ENST00000579853 A0A0U1RQS6 177 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ARGFXA6NJG6 315 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CEACAM4O75871 244 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CLDN7O95471 211 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CLDN1O95832 211 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SPINT3P49223 89 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 UBE2HP62256 183 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ITKQ08881 620 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MRPL49Q13405 166 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 DPYSL2Q16555 572 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 DPCR1Q3MIW9 517 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 BOLA3Q53S33 107 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ANKRD20A8PQ5CZ79 823 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ZRANB3Q5FWF4 1079 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 IRGCQ6NXR0 463 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 KLHL35Q6PF15 583 aa12.01□□□□□ -0.49
CDK5RAP3-216ENST00000579853 KMT5CQ86Y97 462 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms