RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RAB25P57735 213 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PTCHD4Q6ZW05 846 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMCO6Q96DC7 493 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 MED8Q96G25 268 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZNF347Q96SE7 839 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 DPEP3Q9H4B8 488 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 DERAQ9Y315 318 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 DYRK1BQ9Y463 629 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 MOXD2PA6NHM9 499 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 OR4F21O95013 312 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 LPOP22079 712 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PPP2R1BP30154 601 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 RELAQ04206 551 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 PIGGQ5H8A4 983 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMPRSS11AQ6ZMR5 421 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 HID1Q8IV36 788 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 AP3S1Q92572 193 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 MAGEE1Q9HCI5 957 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 SFMBT1Q9UHJ3 866 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 MAPRE3Q9UPY8 281 aa13.03□□□□□ -0.32
PCDHGB3-201ENST00000576222 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 FUOMA2VDF0 154 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 MSCO60682 206 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 RPP40O75818 363 aaKnown RBP13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 IST1P53990 364 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 OLIG2Q13516 323 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 ANGPT1Q15389 498 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 SOWAHAQ2M3V2 549 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZDHHC21Q8IVQ6 265 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 SLC34A3Q8N130 599 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 TCAIMQ8N3R3 496 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 FIBCD1Q8N539 461 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 STYXQ8WUJ0 223 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 ITPKCQ96DU7 683 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 COPS4Q9BT78 406 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 DCSTAMPQ9H295 470 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 MARCH2Q9P0N8 246 aa13.02□□□□□ -0.32
PCDHGB3-201ENST00000576222 FAM234BA2RU67 622 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 RPLP0P05388 317 aaKnown RBP13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PKMP14618 531 aaKnown RBP13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 TIE1P35590 1138 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 TOP6BLQ8N6T0 577 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC9A7Q96T83 725 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 YME1L1Q96TA2 773 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 GPR21Q99679 349 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PDZD7Q9H5P4 517 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 LRTM1Q9HBL6 345 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 KLHL1Q9NR64 748 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF222Q9UK12 451 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 NOTOA8MTQ0 251 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PLOD3O60568 738 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 HDCP19113 662 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 TYMPP19971 482 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PROZP22891 400 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PSMA1P25786 263 aaKnown RBP13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 ADORA2AP29274 412 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 ALDH3A2P51648 485 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 HERVK_113P63132 956 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 DET1Q7L5Y6 550 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 R3HCC1LQ7Z5L2 792 aaKnown RBP13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 FGD2Q7Z6J4 655 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 FCGR1BQ92637 280 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 NACC2Q96BF6 587 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC45A3Q96JT2 553 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 ERVK-6Q9BXR3 956 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 ASB8Q9H765 288 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 GDAP2Q9NXN4 497 aa13.02□□□□□ -0.33
PCDHGB3-201ENST00000576222 PRKD3O94806 890 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 FABP3P05413 133 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 TFAP2AP05549 437 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 CYP2B6P20813 491 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 PAICSP22234 425 aaKnown RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 MYBPC1Q00872 1141 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 PPP1R8Q12972 351 aaKnown RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 GAB3Q8WWW8 586 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 MUS81Q96NY9 551 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 TUBA1CQ9BQE3 449 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 FBRSL1Q9HCM7 1045 aaKnown RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 CCM2LQ9NUG4 571 aaPredicted RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 SDHDO14521 159 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 MATN3O15232 486 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC7A4O43246 635 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZW10O43264 779 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 SIX3O95343 332 aaPredicted RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 CYP11A1P05108 521 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 POLR2EP19388 210 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms