RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 ZFYVE1Q9HBF4 777 aa12.98□□□□□ -0.33
SPG7-221ENST00000569720 GEMIN8Q9NWZ8 242 aaKnown RBP12.98□□□□□ -0.33
SPG7-221ENST00000569720 NENFQ9UMX5 172 aa12.98□□□□□ -0.33
SPG7-221ENST00000569720 HEY1Q9Y5J3 304 aa12.98□□□□□ -0.33
SPG7-221ENST00000569720 EPN1Q9Y6I3 576 aaPredicted RBP12.98□□□□□ -0.33
SPG7-221ENST00000569720 ZNF487B1APH4 448 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 GPR89AB7ZAQ6 455 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 PYCARD-AS1I3L0S3 204 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 APOL1O14791 398 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 MTA2O94776 668 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 SLC25A14O95258 325 aaPredicted RBP12.97□□□□□ -0.33
SPG7-221ENST00000569720 MMP2P08253 660 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 TMEM253P0C7T8 217 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 GPR89BP0CG08 455 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 LIFP15018 202 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
SPG7-221ENST00000569720 ITGB6P18564 788 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 MAP4P27816 1152 aaKnown RBP12.97□□□□□ -0.33
SPG7-221ENST00000569720 CSRP3P50461 194 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 CLCNKAP51800 687 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 MC2RQ01718 297 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 GALNT3Q14435 633 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 MESDQ14696 234 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 PDK1Q15118 436 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 PDPK2PQ6A1A2 396 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 CCDC70Q6NSX1 233 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 NT5DC3Q86UY8 548 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 VSIG1Q86XK7 387 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 PLXDC1Q8IUK5 500 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 NLGN4XQ8N0W4 816 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 BMPERQ8N8U9 685 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 NLGN4YQ8NFZ3 816 aaPredicted RBP12.97□□□□□ -0.33
SPG7-221ENST00000569720 RAPGEF5Q92565 580 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 RTP4Q96DX8 246 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 CATSPER2Q96P56 530 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 PACSIN1Q9BY11 444 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 GPR63Q9BZJ6 419 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 SLC25A18Q9H1K4 315 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 OR2AG1Q9H205 316 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 TRIT1Q9H3H1 467 aaKnown RBP12.97□□□□□ -0.33
SPG7-221ENST00000569720 OSGEPL1Q9H4B0 414 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 TRIM39Q9HCM9 518 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 FBXO8Q9NRD0 319 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 KLC4Q9NSK0 619 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 ATXN10Q9UBB4 475 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 CPNE7Q9UBL6 633 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 PILRAQ9UKJ1 303 aa12.97□□□□□ -0.33
SPG7-221ENST00000569720 PCYT1BQ9Y5K3 369 aaPredicted RBP12.97□□□□□ -0.33
SPG7-221ENST00000569720 BSNQ9UPA5 3926 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 A6NCN8 305 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 LILRA5A6NI73 299 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 PPP1R12AO14974 1030 aaPredicted RBP12.96□□□□□ -0.33
SPG7-221ENST00000569720 NDUFA10O95299 355 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 ZNF8P17098 575 aaPredicted RBP12.96□□□□□ -0.33
SPG7-221ENST00000569720 ARHGAP25P42331 645 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 CCR10P46092 362 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 DCDC1P59894 354 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 INSCQ1MX18 579 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 ALS2CLQ60I27 953 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 KDELC2Q7Z4H8 507 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 TMEM139Q8IV31 216 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 TRAM1L1Q8N609 369 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 CNTD1Q8N815 330 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 TRIM44Q96DX7 344 aaPredicted RBP12.96□□□□□ -0.33
SPG7-221ENST00000569720 IMP4Q96G21 291 aaKnown RBP12.96□□□□□ -0.33
SPG7-221ENST00000569720 SLC45A3Q96JT2 553 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 SRPK1Q96SB4 655 aaKnown RBP12.96□□□□□ -0.33
SPG7-221ENST00000569720 CHP1Q99653 195 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 CTRCQ99895 268 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 SLC25A51Q9H1U9 297 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.33
SPG7-221ENST00000569720 MAGEE1Q9HCI5 957 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 PRDM8Q9NQV8 689 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 KLHL3Q9UH77 587 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 IL17BQ9UHF5 180 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 SHOC2Q9UQ13 582 aa12.96□□□□□ -0.33
SPG7-221ENST00000569720 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
SPG7-221ENST00000569720 POLR1CO15160 346 aaPredicted RBP12.95□□□□□ -0.34
SPG7-221ENST00000569720 KMOO15229 486 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 SUV39H1O43463 412 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 VIPP01282 170 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 SLC4A1P02730 911 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 NFKB2Q00653 900 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 CDK18Q07002 472 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 SLC14A2Q15849 920 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 SLC9A4Q6AI14 798 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 LRRTM4Q86VH4 590 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 RFX6Q8HWS3 928 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 GPR26Q8NDV2 337 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 SLC35G2Q8TBE7 412 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 GLYATL1Q969I3 302 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 AGAP3Q96P47 875 aa12.95□□□□□ -0.34
SPG7-221ENST00000569720 TRIB3Q96RU7 358 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms