RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 ZNF7P17097 686 aaPredicted RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.43
EDC3-217ENST00000569606 CD27P26842 260 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 AKT1P31749 480 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 NSG1P42857 185 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 ADARP55265 1226 aaKnown RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 CLDN2P57739 230 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 PFN3P60673 137 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 SRSF5Q13243 272 aaKnown RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 ZNF528Q3MIS6 628 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 CTSL3PQ5NE16 218 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 RBM20Q5T481 1227 aaKnown RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 ZNF648Q5T619 568 aaPredicted RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 ZNF549Q6P9A3 640 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 GCNT7Q6ZNI0 430 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 CROCCP2Q86T23 111 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 TRIM74Q86UV6 250 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 CYP4X1Q8N118 509 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 GDAP1Q8TB36 358 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 GAB3Q8WWW8 586 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 SNX19Q92543 992 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 FOXJ1Q92949 421 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 ATXN7L3BQ96GX2 97 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 VPS39Q96JC1 886 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 BMFQ96LC9 184 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 HSPA12BQ96MM6 686 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 GPR22Q99680 433 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 APOOQ9BUR5 198 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 LGR4Q9BXB1 951 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 WDR26Q9H7D7 661 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 CORO1CQ9ULV4 474 aaPredicted RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 CA5BQ9Y2D0 317 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 MTO1Q9Y2Z2 717 aaKnown RBP12.37□□□□□ -0.43
EDC3-217ENST00000569606 HS3ST3A1Q9Y663 406 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 PRSS21Q9Y6M0 314 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
EDC3-217ENST00000569606 ZDBF2Q9HCK1 2354 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 IQANK1A0A1B0GTG1 560 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 FAM95CA0A1B0GW59 222 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 MEI4A8MW99 385 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 H0Y8X5 98 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 PRMT5O14744 637 aaPredicted RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 KRT37O76014 449 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 KRT38O76015 456 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 SNRPAP09012 282 aaKnown RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 HOXC4P09017 264 aaPredicted RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 SP9P0CG40 484 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 MYCLP1P12525 358 aaPredicted RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 PKMP14618 531 aaKnown RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 CNTFP26441 200 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 FMO4P31512 558 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 TMEM115Q12893 351 aaPredicted RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 ILF2Q12905 390 aaKnown RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 BMPR2Q13873 1038 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 TMED2Q15363 201 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 LGSNQ5TDP6 509 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 LPCAT2Q7L5N7 544 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 ABI3BPQ7Z7G0 1075 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 ADGRG6Q86SQ4 1221 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 C11orf74Q86VG3 221 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 TMEFF1Q8IYR6 380 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 ABCA7Q8IZY2 2146 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 CLDN19Q8N6F1 224 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 ACVR1CQ8NER5 493 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 MZB1Q8WU39 189 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 HEXDCQ8WVB3 486 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 DCUN1D1Q96GG9 259 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 SERAC1Q96JX3 654 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 BIRC8Q96P09 236 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 NDNQ99608 321 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 AARSD1Q9BTE6 412 aaKnown RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 CLPBQ9H078 707 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 PHPT1Q9NRX4 125 aaPredicted RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 EIF2B4Q9UI10 523 aaKnown RBP12.36□□□□□ -0.43
EDC3-217ENST00000569606 OR1A2Q9Y585 309 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 PCDHB1Q9Y5F3 818 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 SLCO1B1Q9Y6L6 691 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 PIKFYVEQ9Y2I7 2098 aa12.36□□□□□ -0.43
EDC3-217ENST00000569606 TRIM49D1C9J1S8 452 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 CFAP99D6REC4 459 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 HRO43593 1189 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 SGTAO43765 313 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 VEGFDO43915 354 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 ESR1P03372 595 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 RALBP11234 206 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 ATP1B2P14415 290 aaPredicted RBP12.35□□□□□ -0.43
EDC3-217ENST00000569606 MSH3P20585 1137 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 CNR2P34972 360 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 YPEL5P62699 121 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 TNFAIP8L3Q5GJ75 292 aa12.35□□□□□ -0.43
EDC3-217ENST00000569606 MROH9Q5TGP6 573 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms