RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 HS3ST3A1Q9Y663 406 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 RP1L1Q8IWN7 2480 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 ABCA12Q86UK0 2595 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 CELSR1Q9NYQ6 3014 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 A0A0A6YYK5 440 aaPredicted RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 F5H5T6 163 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TMX2-CTNND1H3BSU7 103 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 NVLO15381 856 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 PPP6R2O75170 966 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 H2AFYO75367 372 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 MT-CO1P00395 513 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 APOEP02649 317 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 CYP1A1P04798 512 aaPredicted RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 LPLP06858 475 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ZNF888P0CJ79 500 aaPredicted RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 VDRP11473 427 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 SRCP12931 536 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ITIH1P19827 911 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 CHRNA3P32297 505 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 GTF2H1P32780 548 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 PSMC2P35998 433 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 MXI1P50539 228 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ADKP55263 362 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 RPS21P63220 83 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 CCL7P80098 99 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ENPEPQ07075 957 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ITKQ08881 620 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 CCDC15Q0P6D6 951 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 EIF2B5Q13144 721 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 C1orf61Q13536 156 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 CUL2Q13617 745 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 MORC3Q14149 939 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 SYPL2Q5VXT5 272 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TMEM200BQ69YZ2 307 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 BORAQ6PGQ7 559 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 LCLAT1Q6UWP7 414 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ERN2Q76MJ5 926 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 TAC4Q86UU9 113 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ZFAND4Q86XD8 727 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 RBFAQ8N0V3 343 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 SH2D3CQ8N5H7 860 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ATP11CQ8NB49 1132 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TMIEQ8NEW7 156 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 OR2A12Q8NGT7 310 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 SLC35F5Q8WV83 523 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TFAP2BQ92481 460 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ALG14Q96F25 216 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 BTN2A3PQ96KV6 586 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 GFM1Q96RP9 751 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 PRMT1Q99873 361 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 ZSWIM1Q9BR11 485 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 SOX7Q9BT81 388 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ASPSCR1Q9BZE9 553 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 STRADBQ9C0K7 418 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ADNPQ9H2P0 1102 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ZSCAN16Q9H4T2 348 aaPredicted RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 DYRK4Q9NR20 520 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 DDX56Q9NY93 547 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 SPASTQ9UBP0 616 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 APOBEC3BQ9UH17 382 aaKnown RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 VPS28Q9UK41 221 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TRHDEQ9UKU6 1024 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 KIAA1257Q9ULG3 409 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 PNMA8BQ9ULN7 279 aaPredicted RBP5.7□□□□□ -1.5
CDH13-211ENST00000568770 PADI4Q9UM07 663 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 MTMR6Q9Y217 621 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TRAF3IP3Q9Y228 551 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 ZDHHC9Q9Y397 364 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 MED13Q9UHV7 2174 aa5.7□□□□□ -1.5
CDH13-211ENST00000568770 TNRC6AQ8NDV7 1962 aaKnown RBP5.69□□□□□ -1.5
CDH13-211ENST00000568770 OTOGQ6ZRI0 2925 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 A0A0A6YYJ9 748 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 A0A0G2JNJ9 132 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 A0A1W2PQM1 296 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 ENO4A6NNW6 628 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 KCNU1A8MYU2 1149 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 ALG1L2C9J202 215 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 D6RAR5 112 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 LMO7DNF2Z398 122 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 K7ERQ8 282 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 M0QYV0 167 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 FPGTO14772 594 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 YY2O15391 372 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 CALCAP01258 141 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 RPLP0P05388 317 aaKnown RBP5.69□□□□□ -1.5
CDH13-211ENST00000568770 ANXA6P08133 673 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 ADRB3P13945 408 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 TSHRP16473 764 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 BMP7P18075 431 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 CSF2RBP32927 897 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 ETV5P41161 510 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 CASRP41180 1078 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 KCNC1P48547 511 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 POLE2P56282 527 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 CUL4AQ13619 759 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 NFIL3Q16649 462 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 CBWD6Q4V339 395 aa5.69□□□□□ -1.5
CDH13-211ENST00000568770 CBWD3Q5JTY5 395 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms