RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TEX26Q8N6G2 289 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 KLHL6Q8WZ60 621 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 ZDHHC12Q96GR4 267 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 CSPG4P5Q96PW8 444 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 GPR87Q9BY21 358 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 ING2Q9H160 280 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 CLSTN2Q9H4D0 955 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 PDE7BQ9NP56 450 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 KLC4Q9NSK0 619 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 ETNK2Q9NVF9 386 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 TAS2R14Q9NYV8 317 aa11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 ANKRD17O75179 2603 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-209ENST00000568569 C1orf232A0A0U1RR37 186 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 TMEM191CA6NGB0 347 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 TIAF1O95411 115 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 CLDN7O95471 211 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 NELFEP18615 380 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 CA4P22748 312 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 COL8A1P27658 744 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 PTPN4P29074 926 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 SLC19A1P41440 591 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 SPINT3P49223 89 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 CCL11P51671 97 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 RPL26P61254 145 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 RPS15P62841 145 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 CHAF1BQ13112 559 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 MRPL49Q13405 166 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 TUBB3Q13509 450 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 CHRNA6Q15825 494 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 SMTNL2Q2TAL5 461 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 CDKAL1Q5VV42 579 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 ALG1LQ6GMV1 187 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 POLNQ7Z5Q5 900 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 TICAM1Q8IUC6 712 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 LRRC49Q8IUZ0 686 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 ENOX1Q8TC92 643 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 RSC1A1Q92681 617 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 FCRL4Q96PJ5 515 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 WDR24Q96S15 920 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 LYSMD1Q96S90 227 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 TDRD1Q9BXT4 1180 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 FAM83DQ9H4H8 585 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 SLAMF7Q9NQ25 335 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 POT1Q9NUX5 634 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 PKD2L2Q9NZM6 624 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 SCHIP1Q9P0W5 487 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 ZNF624Q9P2J8 865 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 ATXN10Q9UBB4 475 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 RARRES3Q9UL19 164 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 RPL26L1Q9UNX3 145 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 CHKBQ9Y259 395 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 ZNF451Q9Y4E5 1061 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 PCDHGB7Q9Y5F8 929 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
GTF3C1-209ENST00000568569 SHANK1Q9Y566 2161 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 RGSL1A5PLK6 1076 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 ARGFXA6NJG6 315 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 PDZK1P1A8MUH7 402 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 TMCO5BA8MYB1 307 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 KIF1CO43896 1103 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 DPM1O60762 260 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 CLDN1O95832 211 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 FERP16591 822 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 ZNF8P17098 575 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 CES1P23141 567 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 IL1R2P27930 398 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 PCK1P35558 622 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 RPS18P62269 152 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 DSC2Q02487 901 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 IL10RAQ13651 578 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 INSCQ1MX18 579 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 BOLA3Q53S33 107 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 TDRD12Q587J7 1177 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 ANKRD20A8PQ5CZ79 823 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 ZNF569Q5MCW4 686 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 PWWP2BQ6NUJ5 590 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 IRGCQ6NXR0 463 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 JMJD6Q6NYC1 403 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 FAM92BQ6ZTR7 304 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 BPHLQ86WA6 291 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 RBM12BQ8IXT5 1001 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 PRR7Q8TB68 274 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 CCHCR1Q8TD31 782 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 UBXN4Q92575 508 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 HSPH1Q92598 858 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 RUFY1Q96T51 708 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 IGSF5Q9NSI5 407 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 MAP10Q9P2G4 905 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 EPHA6Q9UF33 1036 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 TTLL3Q9Y4R7 772 aa11.61□□□□□ -0.55
GTF3C1-209ENST00000568569 LGALS16A8MUM7 142 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 CEACAM4O75871 244 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 SLC25A14O95258 325 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 PRLP01236 227 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms