RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 ZBTB2Q8N680 514 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 CCDC185Q8N715 623 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 EMC1Q8N766 993 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 AP2M1Q96CW1 435 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 PLEKHG4BQ96PX9 1271 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 MLPHQ9BV36 600 aaPredicted RBP13.56□□□□□ -0.24
SMG1-213ENST00000567737 CHST8Q9H2A9 424 aa13.56□□□□□ -0.24
SMG1-213ENST00000567737 METTL5Q9NRN9 209 aaKnown RBP13.56□□□□□ -0.24
SMG1-213ENST00000567737 SUCOQ9UBS9 1254 aaKnown RBP13.56□□□□□ -0.24
SMG1-213ENST00000567737 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 CREB3O43889 395 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 DNAJC6O75061 913 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 ZSCAN22P10073 491 aaPredicted RBP13.55□□□□□ -0.24
SMG1-213ENST00000567737 LHCGRP22888 699 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 CDH5P33151 784 aaPredicted RBP13.55□□□□□ -0.24
SMG1-213ENST00000567737 NSUN2Q08J23 767 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMG1-213ENST00000567737 STIM1Q13586 685 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 MYBPC3Q14896 1274 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 STRADAQ7RTN6 431 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 MRGPRGQ86SM5 289 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 RAB43Q86YS6 212 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 GRHL3Q8TE85 626 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 UBXN4Q92575 508 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 RSC1A1Q92681 617 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 RELTQ969Z4 430 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 ZNF514Q96K75 400 aaPredicted RBP13.55□□□□□ -0.24
SMG1-213ENST00000567737 TRAPPC9Q96Q05 1148 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 NLNQ9BYT8 704 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 FGF21Q9NSA1 209 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 VPS18Q9P253 973 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 APEX2Q9UBZ4 518 aa13.55□□□□□ -0.24
SMG1-213ENST00000567737 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
SMG1-213ENST00000567737 DCHS2Q6V1P9 2916 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.54□□□□□ -0.24
SMG1-213ENST00000567737 NPIPB15A6NHN6 443 aaPredicted RBP13.54□□□□□ -0.24
SMG1-213ENST00000567737 EBLN1P0CF75 366 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 CD99P14209 185 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 XRCC1P18887 633 aaPredicted RBP13.54□□□□□ -0.24
SMG1-213ENST00000567737 ARL4DP49703 201 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 GSDMDP57764 484 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 KRTAP10-9P60411 292 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 PNOCQ13519 176 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 KCNAB1Q14722 419 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 SMTNL2Q2TAL5 461 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 CCDC14Q49A88 953 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 FAM69BQ5VUD6 431 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 TECPR1Q7Z6L1 1165 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 SLFN11Q7Z7L1 901 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 PYROXD2Q8N2H3 581 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 GALNT16Q8N428 558 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 ZNF808Q8N4W9 903 aaPredicted RBP13.54□□□□□ -0.24
SMG1-213ENST00000567737 CLEC1AQ8NC01 280 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 EXD1Q8NHP7 514 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 FAR1Q8WVX9 515 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 RXFP2Q8WXD0 754 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 NTAN1Q96AB6 310 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 COX14Q96I36 57 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 SLC41A2Q96JW4 573 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 FER1L6-AS2Q96M78 137 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 SCAND2PQ9GZW5 306 aaPredicted RBP13.54□□□□□ -0.24
SMG1-213ENST00000567737 ABCG8Q9H221 673 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 OSGEPL1Q9H4B0 414 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 ZNF552Q9H707 407 aaPredicted RBP13.54□□□□□ -0.24
SMG1-213ENST00000567737 LRRC19Q9H756 370 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 EPHA6Q9UF33 1036 aa13.54□□□□□ -0.24
SMG1-213ENST00000567737 NIPBLQ6KC79 2804 aaeCLIP13.54□□□□□ -0.24
SMG1-213ENST00000567737 ARHGAP42A6NI28 874 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 KCNN4O15554 427 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 SOCS5O75159 536 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 ZNF202O95125 648 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 JCHAINP01591 159 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 ATP1A1P05023 1023 aaKnown RBP13.53□□□□□ -0.24
SMG1-213ENST00000567737 TNFAIP3P21580 790 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 CA5AP35218 305 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 TSPAN33Q86UF1 283 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 SCAMP4Q969E2 229 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 PCMTD1Q96MG8 357 aaPredicted RBP13.53□□□□□ -0.24
SMG1-213ENST00000567737 GSDMAQ96QA5 445 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 WDR77Q9BQA1 342 aaPredicted RBP13.53□□□□□ -0.24
SMG1-213ENST00000567737 SP110Q9HB58 689 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 NOVA2Q9UNW9 492 aaKnown RBP13.53□□□□□ -0.24
SMG1-213ENST00000567737 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
SMG1-213ENST00000567737 IGHV5-51A0A0C4DH38 117 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 A0A1W2PQJ5 194 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 MEN1O00255 615 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 FGF10O15520 208 aaPredicted RBP13.52□□□□□ -0.25
SMG1-213ENST00000567737 HTRA2O43464 458 aaPredicted RBP13.52□□□□□ -0.25
SMG1-213ENST00000567737 GNA14O95837 355 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 IGHEP01854 428 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 SLC9A1P19634 815 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 OTX2P32243 289 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 SLC19A1P41440 591 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 PAPOLAP51003 745 aaKnown RBP13.52□□□□□ -0.25
SMG1-213ENST00000567737 RENBPP51606 427 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 BPIFB4P59827 614 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 CDC16Q13042 620 aa13.52□□□□□ -0.25
SMG1-213ENST00000567737 RFTN1Q14699 578 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms