RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ANKRD34CP0C6C1 535 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 XRCC1P18887 633 aaPredicted RBP18.38■□□□□ 0.53
LINC01238-205ENST00000567549 MAPK9P45984 424 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 SLC10A2Q12908 348 aaPredicted RBP18.38■□□□□ 0.53
LINC01238-205ENST00000567549 GALNT3Q14435 633 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 TBR1Q16650 682 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 LINC00303Q3SY05 128 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 SNAP47Q5SQN1 464 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 ARHGAP22Q7Z5H3 698 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 LRRTM4Q86VH4 590 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 PLD5Q8N7P1 536 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 BRSK1Q8TDC3 778 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 GLYATL1Q969I3 302 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 AGAP3Q96P47 875 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 PLEKHG4BQ96PX9 1271 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 TIMM29Q9BSF4 260 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 SLC25A18Q9H1K4 315 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 OR2AG1Q9H205 316 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 GPN2Q9H9Y4 310 aaPredicted RBP18.38■□□□□ 0.53
LINC01238-205ENST00000567549 INTUQ9ULD6 942 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 CNOT6Q9ULM6 557 aaKnown RBP18.38■□□□□ 0.53
LINC01238-205ENST00000567549 ZNF711Q9Y462 761 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 OAS3Q9Y6K5 1087 aaKnown RBP18.38■□□□□ 0.53
LINC01238-205ENST00000567549 CFAP46Q8IYW2 2715 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 POLR1CO15160 346 aaPredicted RBP18.37■□□□□ 0.53
LINC01238-205ENST00000567549 SPOPO43791 374 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 WISP1O95388 367 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 NDST3O95803 873 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 MMP2P08253 660 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 MPSTP25325 297 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 CCR10P46092 362 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 CSRP3P50461 194 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 ABHD18Q0P651 414 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 ZBTB17Q13105 803 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 ANKS6Q68DC2 871 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 KDELC2Q7Z4H8 507 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 TMC3Q7Z5M5 1100 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 CNGA4Q8IV77 575 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 ESX1Q8N693 406 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 EXD3Q8N9H8 876 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 SLC45A3Q96JT2 553 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 SMIM14Q96QK8 99 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 WDR24Q96S15 920 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 PACSIN1Q9BY11 444 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 LUC7LQ9NQ29 371 aaKnown RBP18.37■□□□□ 0.53
LINC01238-205ENST00000567549 KLC4Q9NSK0 619 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 POT1Q9NUX5 634 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 OCIAD1Q9NX40 245 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 HACD3Q9P035 362 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 ATXN10Q9UBB4 475 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 PRKAB1Q9Y478 270 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 PIEZO2Q9H5I5 2752 aa18.37■□□□□ 0.53
LINC01238-205ENST00000567549 A6NCN8 305 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 A8MU76 341 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 PDZK1P1A8MUH7 402 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 CHUKO15111 745 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 FAM87AP0C7U9 286 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 AMD1P17707 334 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 IDSP22304 550 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 HALP42357 657 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 MN1Q10571 1320 aaPredicted RBP18.36■□□□□ 0.53
LINC01238-205ENST00000567549 MAP7Q14244 749 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 PCSK7Q16549 785 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 ASTE1Q2TB18 679 aaPredicted RBP18.36■□□□□ 0.53
LINC01238-205ENST00000567549 TEX44Q53QW1 395 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 ALS2CLQ60I27 953 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 KLHL35Q6PF15 583 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 ZNF761Q86XN6 746 aaPredicted RBP18.36■□□□□ 0.53
LINC01238-205ENST00000567549 CNTD1Q8N815 330 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 JPH3Q8WXH2 748 aaPredicted RBP18.36■□□□□ 0.53
LINC01238-205ENST00000567549 RTP4Q96DX8 246 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 VPS35Q96QK1 796 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 TRIB3Q96RU7 358 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 VAT1Q99536 393 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 SLC12A9Q9BXP2 914 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 ABHD10Q9NUJ1 306 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 TMEM9Q9P0T7 183 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 PILRAQ9UKJ1 303 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 SHOC2Q9UQ13 582 aa18.36■□□□□ 0.53
LINC01238-205ENST00000567549 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.36■□□□□ 0.53
LINC01238-205ENST00000567549 SPTA1P02549 2419 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 CDK14O94921 469 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 SLC4A1P02730 911 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 LIFP15018 202 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 ZNF7P17097 686 aaPredicted RBP18.35■□□□□ 0.53
LINC01238-205ENST00000567549 ZNF8P17098 575 aaPredicted RBP18.35■□□□□ 0.53
LINC01238-205ENST00000567549 SRSF6Q13247 344 aaKnown RBP18.35■□□□□ 0.53
LINC01238-205ENST00000567549 SEPT6Q14141 434 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 IHHQ14623 411 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 WASH2PQ6VEQ5 465 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 TMEM26Q6ZUK4 368 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 BMPERQ8N8U9 685 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 GDAP1Q8TB36 358 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 DTX3LQ8TDB6 740 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 TFB1MQ8WVM0 346 aaKnown RBP18.35■□□□□ 0.53
LINC01238-205ENST00000567549 OLFM3Q96PB7 478 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 NHEJ1Q9H9Q4 299 aaPredicted RBP18.35■□□□□ 0.53
LINC01238-205ENST00000567549 GLOD4Q9HC38 313 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 WASH6PQ9NQA3 447 aa18.35■□□□□ 0.53
LINC01238-205ENST00000567549 FAM153AQ9UHL3 310 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms