RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 KRCC1Q9NPI7 259 aaPredicted RBP5□□□□□ -1.61
CNOT1-209ENST00000566240 TRMT1Q9NXH9 659 aaKnown RBP5□□□□□ -1.61
CNOT1-209ENST00000566240 IL17BQ9UHF5 180 aa5□□□□□ -1.61
CNOT1-209ENST00000566240 ZNF541Q9H0D2 1346 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 A0A0U1RQG5 324 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 PI4K2BG5E9Z4 385 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 WDR46O15213 610 aaKnown RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 SLC7A4O43246 635 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 SPINT2O43291 252 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 CREG1O75629 220 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 SOX30O94993 753 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 CYP1A2P05177 515 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 CELA2AP08217 269 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 PFKFB1P16118 471 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 MCCP23508 829 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 DNASE1P24855 282 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 NMBRP28336 390 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 BDKRB2P30411 391 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 HOXC8P31273 242 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 TLX1P31314 330 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 ENTPD1P49961 510 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 FOXM1Q08050 763 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 TRAF1Q13077 416 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 PTGR1Q14914 329 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 DECR1Q16698 335 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 ATP13A5Q4VNC0 1218 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 FRG2Q64ET8 278 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 LCN10Q6JVE6 187 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 CAVIN1Q6NZI2 390 aaKnown RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 KCTD18Q6PI47 426 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 PAPD4Q6PIY7 484 aaKnown RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 Q6ZTK2 550 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 PIP4P1Q86T03 277 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 SNX32Q86XE0 403 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 IQCA1Q86XH1 822 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 FOXRED2Q8IWF2 684 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 CAMKVQ8NCB2 501 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 C16orf52Q8NHV5 167 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 RND1Q92730 232 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 FAM162AQ96A26 154 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 SPACA9Q96E40 222 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 THUMPD3Q9BV44 507 aaKnown RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 ANKZF1Q9H8Y5 726 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 PIH1D3Q9NQM4 214 aaKnown RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 MBNL1Q9NR56 388 aaKnown RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 IL36RNQ9UBH0 155 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 HS3ST3B1Q9Y662 390 aa4.99□□□□□ -1.61
CNOT1-209ENST00000566240 ZFP37Q9Y6Q3 630 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-209ENST00000566240 BECN2A8MW95 431 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 H0YGN5 161 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 NDUFS4O43181 175 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 PRAMEF11O60813 436 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 SLU7O95391 586 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 HRH2P25021 359 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 RPL3P39023 403 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 APOBEC1P41238 236 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 RFX5P48382 616 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 NPY4RP50391 375 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 POLGP54098 1239 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 HNRNPH2P55795 449 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 RBMS2Q15434 407 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 MEP1AQ16819 746 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 SHC4Q6S5L8 630 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 ADCK2Q7Z695 626 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 NRROSQ86YC3 692 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 TMEM199Q8N511 208 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 AFAP1Q8N556 730 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 ARFGAP1Q8N6T3 406 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 PCDH20Q8N6Y1 951 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 RHBDF1Q96CC6 855 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 URB1-AS1Q96HZ7 61 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 SORCS2Q96PQ0 1159 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 NEK1Q96PY6 1258 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 FNBP1Q96RU3 617 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 CRAMP1Q96RY5 1269 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 SMC6Q96SB8 1091 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 GFI1Q99684 422 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 SEMA3CQ99985 751 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 GPATCH1Q9BRR8 931 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 MMTAG2Q9BU76 263 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 NOL11Q9H8H0 719 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 CNOT10Q9H9A5 744 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 C17orf75Q9HAS0 396 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 NRIP3Q9NQ35 241 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 TRNAU1APQ9NX07 287 aaKnown RBP4.98□□□□□ -1.61
CNOT1-209ENST00000566240 TINAGQ9UJW2 476 aa4.98□□□□□ -1.61
CNOT1-209ENST00000566240 ATXN2Q99700 1313 aaKnown RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 A0A0B4J293 547 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 J3QR06 171 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 OVOL3O00110 214 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 VWA5AO00534 786 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 HS3ST1O14792 307 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 PSMA7O14818 248 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 KCNN4O15554 427 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 ASAP2O43150 1006 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 ZNF217O75362 1048 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 CELF2O95319 508 aaKnown RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 PENKP01210 267 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 FGBP02675 491 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 FGF2P09038 288 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms