RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 LAMB3Q13751 1172 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 BOLA3Q53S33 107 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 TMCO3Q6UWJ1 677 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 TMEM26Q6ZUK4 368 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 PRSS42Q7Z5A4 293 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 TMEM135Q86UB9 458 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 EFCAB3Q8N7B9 438 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 NEK11Q8NG66 645 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 NSMCE1Q8WV22 266 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 FATE1Q969F0 183 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 STAMBPL1Q96FJ0 436 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 SMIM14Q96QK8 99 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 OR6C1Q96RD1 312 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 ERGIC2Q96RQ1 377 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 GPR87Q9BY21 358 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 TWSG1Q9GZX9 223 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 GRPEL1Q9HAV7 217 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 LHX9Q9NQ69 397 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 SEPT11Q9NVA2 429 aaKnown RBP12.59□□□□□ -0.39
RNF40-208ENST00000565995 EPHA6Q9UF33 1036 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 KLHL3Q9UH77 587 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 AMACRQ9UHK6 382 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 RPL26L1Q9UNX3 145 aaKnown RBP12.59□□□□□ -0.39
RNF40-208ENST00000565995 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 PRKAB1Q9Y478 270 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 SLC30A1Q9Y6M5 507 aa12.59□□□□□ -0.39
RNF40-208ENST00000565995 DIDO1Q9BTC0 2240 aaKnown RBP12.58□□□□□ -0.39
RNF40-208ENST00000565995 ZGRF1Q86YA3 2104 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 CDC14CA4D256 554 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 FADS2P1A8MWK0 482 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 H3BRJ5 948 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 CHUKO15111 745 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 GRID2O43424 1007 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 UBXN7O94888 489 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 CLDN7O95471 211 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 CCDC172P0C7W6 258 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 GZMAP12544 262 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 SPINT3P49223 89 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 SH3BP2P78314 561 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 DNASE1L3Q13609 305 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 UGT8Q16880 541 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 CYB5D1Q6P9G0 228 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 BPHLQ86WA6 291 aaPredicted RBP12.58□□□□□ -0.4
RNF40-208ENST00000565995 THAP4Q8WY91 577 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 TRIM55Q9BYV6 548 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 BRD8Q9H0E9 1235 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 ZNF624Q9P2J8 865 aaPredicted RBP12.58□□□□□ -0.4
RNF40-208ENST00000565995 LIMA1Q9UHB6 759 aaKnown RBP12.58□□□□□ -0.4
RNF40-208ENST00000565995 PCDHGB7Q9Y5F8 929 aa12.58□□□□□ -0.4
RNF40-208ENST00000565995 POLEQ07864 2286 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 PIPSLA2A3N6 862 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 KATNA1O75449 491 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 CEACAM4O75871 244 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 RNF224P0DH78 156 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 ACP5P13686 325 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 NELFEP18615 380 aaKnown RBP12.57□□□□□ -0.4
RNF40-208ENST00000565995 IL1R2P27930 398 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 SERPINB6P35237 376 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 ARL4AP40617 200 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 SLC19A1P41440 591 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 MAPK9P45984 424 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 ABRAXAS1Q6UWZ7 409 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 WASH2PQ6VEQ5 465 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 PPP1R3BQ86XI6 285 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 PHYKPLQ8IUZ5 450 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 RASGRP3Q8IV61 690 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 RBM12BQ8IXT5 1001 aaKnown RBP12.57□□□□□ -0.4
RNF40-208ENST00000565995 ATPAF2Q8N5M1 289 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 MAML1Q92585 1016 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 CSPG4P5Q96PW8 444 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 TDRD1Q9BXT4 1180 aaKnown RBP12.57□□□□□ -0.4
RNF40-208ENST00000565995 POLR1EQ9GZS1 481 aaKnown RBP12.57□□□□□ -0.4
RNF40-208ENST00000565995 FAM83DQ9H4H8 585 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 NT5MQ9NPB1 228 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 WASH6PQ9NQA3 447 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 SCHIP1Q9P0W5 487 aaPredicted RBP12.57□□□□□ -0.4
RNF40-208ENST00000565995 ATXN10Q9UBB4 475 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 MYO6Q9UM54 1294 aa12.57□□□□□ -0.4
RNF40-208ENST00000565995 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
RNF40-208ENST00000565995 LGALS16A8MUM7 142 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 ATMINO43313 823 aaPredicted RBP12.56□□□□□ -0.4
RNF40-208ENST00000565995 SNX2O60749 519 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 DNAJB5O75953 348 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 TPM3P06753 285 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 IL4RP24394 825 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 CAPZBP47756 277 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 LEPRP48357 1165 aaKnown RBP12.56□□□□□ -0.4
RNF40-208ENST00000565995 FANCCQ00597 558 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 NADK2Q4G0N4 442 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 FILIP1LQ4L180 1135 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 ZNF517Q6ZMY9 492 aaPredicted RBP12.56□□□□□ -0.4
RNF40-208ENST00000565995 HPS6Q86YV9 775 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 TICAM1Q8IUC6 712 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 ARRDC2Q8TBH0 407 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 FAM71BQ8TC56 605 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 CT55Q8WUE5 264 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 TEKT4Q8WW24 435 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
RNF40-208ENST00000565995 TGM7Q96PF1 710 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms