RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 NFATC3Q12968 1075 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 GTF2H3Q13889 308 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 PPP2R5EQ16537 467 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 TBR1Q16650 682 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 LINC00303Q3SY05 128 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 TFDP3Q5H9I0 405 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 ANKS6Q68DC2 871 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 WDR74Q6RFH5 385 aaPredicted RBP6.33□□□□□ -1.4
TCF4-228ENST00000565393 XKR5Q6UX68 686 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 DTX1Q86Y01 620 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 PLXDC1Q8IUK5 500 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 CACNA2D3Q8IZS8 1091 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 AVL9Q8NBF6 648 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 BRSK1Q8TDC3 778 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 BLOC1S5Q8TDH9 187 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 NKD1Q969G9 470 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 HAUS1Q96CS2 278 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 TRIB3Q96RU7 358 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 FERMT1Q9BQL6 677 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 TBC1D10AQ9BXI6 508 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 SEMA4CQ9C0C4 833 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 UGT1A7Q9HAW7 530 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 UGT1A10Q9HAW8 530 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 UGT1A8Q9HAW9 530 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 LUC7LQ9NQ29 371 aaKnown RBP6.33□□□□□ -1.4
TCF4-228ENST00000565393 PKP3Q9Y446 797 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 PCDHGA3Q9Y5H0 932 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 SPO11Q9Y5K1 396 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 HEMK1Q9Y5R4 338 aaPredicted RBP6.33□□□□□ -1.4
TCF4-228ENST00000565393 B3GALT1Q9Y5Z6 326 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 USP24Q9UPU5 2620 aa6.33□□□□□ -1.4
TCF4-228ENST00000565393 LOC285095A0A1B0GVY8 99 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 B4E171 279 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 GPR89AB7ZAQ6 455 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CHUKO15111 745 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PSTPIP1O43586 416 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 SLC28A2O43868 658 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 RAD1O60671 282 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 RASSF9O75901 435 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 UBXN7O94888 489 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 AGTP01019 485 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 EPOP01588 193 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 ITGB2P05107 769 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PTMAP06454 111 aaKnown RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 GPR89BP0CG08 455 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 THRAP10827 490 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PECAM1P16284 738 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 MAP4P27816 1152 aaKnown RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 CSF2RBP32927 897 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CD68P34810 354 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 CYLC1P35663 651 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 TSPAN7P41732 249 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 HALP42357 657 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CLCNKAP51800 687 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 EPHA4P54764 986 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 RAB15P59190 212 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 ADCY2Q08462 1091 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 WASHC5Q12768 1159 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 TBX2Q13207 712 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 PRPSAP1Q14558 356 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PRKD1Q15139 912 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 NOMO1Q15155 1222 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CHRNA6Q15825 494 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 SLC14A2Q15849 920 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 ATP13A5Q4VNC0 1218 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 SIRPB2Q5JXA9 342 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 ZDHHC20Q5W0Z9 365 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PDPK2PQ6A1A2 396 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 C16orf46Q6P387 395 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 DARS2Q6PI48 645 aaKnown RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 ABRAXAS1Q6UWZ7 409 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CEACAM20Q6UY09 585 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PRICKLE2Q7Z3G6 844 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 ARHGAP22Q7Z5H3 698 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 DAAM2Q86T65 1068 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 TRAPPC5Q8IUR0 188 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CCDC170Q8IYT3 715 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 ZNF567Q8N184 647 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 IPMKQ8NFU5 416 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 HTR3CQ8WXA8 447 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PMEPA1Q969W9 287 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 KIAA1143Q96AT1 154 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 TADA1Q96BN2 335 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CXorf40BQ96DE9 158 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 RBM41Q96IZ5 413 aaKnown RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 ELMO2Q96JJ3 720 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 OLFM3Q96PB7 478 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 TGM7Q96PF1 710 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 TEFMQ96QE5 360 aaKnown RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 FCRL5Q96RD9 977 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 VAT1Q99536 393 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 DDA1Q9BW61 102 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 FSD1LQ9BXM9 530 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 GOLPH3Q9H4A6 298 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 TRABDQ9H4I3 376 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 C10orf88Q9H8K7 445 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 IL26Q9NPH9 171 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 FBXO8Q9NRD0 319 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms