RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 PHF7Q9BWX1 381 aaPredicted RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 EGLN1Q9GZT9 426 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 DDX43Q9NXZ2 648 aaKnown RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 C9orf78Q9NZ63 289 aaPredicted RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 ERVK-11Q9UQG0 969 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 PCDHGB3Q9Y5G1 929 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 SRCAPQ6ZRS2 3230 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 WDR81Q562E7 1941 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 RGS12O14924 1447 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 MARF1Q9Y4F3 1742 aaKnown RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 EP400Q96L91 3159 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ERI2A8K979 691 aaKnown RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 PMS2P5A8MQ11 134 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 INHBAP08476 426 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ITGA2P17301 1181 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 PGM1P36871 562 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 LINC01547P58512 204 aaPredicted RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 UBE3AQ05086 875 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.12□□□□□ -1.75
CHD9-212ENST00000564641 PPP2R5BQ15173 497 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ZNF766Q5HY98 468 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 GPATCH4Q5T3I0 446 aaKnown RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 SLC35E4Q6ICL7 350 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ZNF852Q6ZMS4 543 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 KCTD8Q6ZWB6 473 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 SLC35F3Q8IY50 421 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 SPATA6LQ8N4H0 392 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ZBTB2Q8N680 514 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 PLD5Q8N7P1 536 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ZNF485Q8NCK3 441 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 TAS1R2Q8TE23 839 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 LGALS12Q96DT0 336 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ELP4Q96EB1 424 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 C17orf77Q96MU5 243 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 MOV10L1Q9BXT6 1211 aaKnown RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 GFRA4Q9GZZ7 299 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 INTS2Q9H0H0 1204 aaKnown RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 GPR108Q9NPR9 543 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 LAS1LQ9Y4W2 734 aaKnown RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 LSM4Q9Y4Z0 139 aaKnown RBP4.12□□□□□ -1.75
CHD9-212ENST00000564641 SBNO1A3KN83 1393 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 KNDC1Q76NI1 1749 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ATRNO75882 1429 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 TNS3Q68CZ2 1445 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 ANKARQ7Z5J8 1434 aa4.12□□□□□ -1.75
CHD9-212ENST00000564641 MYOM2P54296 1465 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 TTC36A6NLP5 189 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 HMGB2P26583 209 aaKnown RBP4.11□□□□□ -1.75
CHD9-212ENST00000564641 MAN1A1P33908 653 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 FASLGP48023 281 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 CDH15P55291 814 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 TBX2Q13207 712 aaPredicted RBP4.11□□□□□ -1.75
CHD9-212ENST00000564641 GTF2H2Q13888 395 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 ZNF234Q14588 700 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 NFIL3Q16649 462 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 SLC45A4Q5BKX6 768 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 JAKMIP3Q5VZ66 844 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 TXNDC8Q6A555 127 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 GTF2H2CQ6P1K8 395 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 CYP26C1Q6V0L0 522 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 ZNF34Q8IZ26 560 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 CADM4Q8NFZ8 388 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 OR10V1Q8NGI7 309 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 HUS1BQ8NHY5 278 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 ZCCHC10Q8TBK6 192 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 DUSP19Q8WTR2 217 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 FRAT1Q92837 279 aaPredicted RBP4.11□□□□□ -1.75
CHD9-212ENST00000564641 SCRN2Q96FV2 425 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 QRFPRQ96P65 431 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 FAM110AQ9BQ89 295 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 NDST4Q9H3R1 872 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 PPP1R3EQ9H7J1 279 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 MMP25Q9NPA2 562 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 HINT3Q9NQE9 182 aaKnown RBP4.11□□□□□ -1.75
CHD9-212ENST00000564641 ITM2CQ9NQX7 267 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 CTNNAL1Q9UBT7 734 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 NWD2Q9ULI1 1742 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 UTYO14607 1347 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 PARD3Q8TEW0 1356 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 NOTCH3Q9UM47 2321 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 PIK3C2GO75747 1445 aa4.11□□□□□ -1.75
CHD9-212ENST00000564641 YTHDC2Q9H6S0 1430 aaKnown RBP4.11□□□□□ -1.75
CHD9-212ENST00000564641 COL2A1P02458 1487 aaPredicted RBP4.11□□□□□ -1.75
CHD9-212ENST00000564641 IGKV3D-15A0A087WSY6 115 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 NCAM2O15394 837 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 URODP06132 367 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 CYC1P08574 325 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 HOXB5P09067 269 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 MYOD1P15172 320 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 EDN2P20800 178 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 CORO1AP31146 461 aaKnown RBP4.1□□□□□ -1.75
CHD9-212ENST00000564641 SHMT1P34896 483 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 CASP2P42575 452 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 RNPS1Q15287 305 aaKnown RBP4.1□□□□□ -1.75
CHD9-212ENST00000564641 EIF2S3LQ2VIR3 472 aaKnown RBP4.1□□□□□ -1.75
CHD9-212ENST00000564641 KRT71Q3SY84 523 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 ZNF876PQ49A33 203 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 INTS11Q5TA45 600 aaKnown RBP4.1□□□□□ -1.75
CHD9-212ENST00000564641 TTI2Q6NXR4 508 aa4.1□□□□□ -1.75
CHD9-212ENST00000564641 ARHGAP11AQ6P4F7 1023 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms