RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TP53INP2Q8IXH6 220 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 LILRA2Q8N149 483 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 METTL25Q8N6Q8 603 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 SH3KBP1Q96B97 665 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 HAPLN2Q9GZV7 340 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 MROH8Q9H579 483 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 EMCNQ9ULC0 261 aa12.52□□□□□ -0.4
COMMD4-209ENST00000564068 EFCAB9A8MZ26 197 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 RFXANKO14593 260 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 XYLBO75191 536 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 ITGALP20701 1170 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 HOXD10P28358 340 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 CHI3L1P36222 383 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 GRM5P41594 1212 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 DIO3P55073 304 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 KIAA0408Q6ZU52 694 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 PIM3Q86V86 326 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 SYT12Q8IV01 421 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 FAM9CQ8IZT9 166 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 SLC7A5P1Q8MH63 180 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 BIRC7Q96CA5 298 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 GPR21Q99679 349 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 HEPHQ9BQS7 1158 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 SPATA7Q9P0W8 599 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 C7orf72A4D263 438 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 hCG_2039718K7EN88 272 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 FGF10O15520 208 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 XPNPEP2O43895 674 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 GABBR2O75899 941 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 EGFRP00533 1210 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 IMPDH1P20839 514 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 RXRGP48443 463 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 SLC16A1P53985 500 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 PHC1P78364 1004 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 LAPTM4AQ15012 233 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 CRY1Q16526 586 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 SDHAF4Q5VUM1 108 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 ST13P5Q8NFI4 369 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 PANX1Q96RD7 426 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 LRRC3Q9BY71 257 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 FZD8Q9H461 694 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 AGO3Q9H9G7 860 aaKnown RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 H2AFY2Q9P0M6 372 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 CRNNQ9UBG3 495 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 TNPO3Q9Y5L0 923 aaKnown RBP12.52□□□□□ -0.41
COMMD4-209ENST00000564068 AKAP11Q9UKA4 1901 aa12.52□□□□□ -0.41
COMMD4-209ENST00000564068 SMIM28A0A1B0GU29 152 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 GPR182O15218 404 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 POLD2P49005 469 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SULT2A1Q06520 285 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SERPINB11Q96P15 392 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 CCM2LQ9NUG4 571 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ARL15Q9NXU5 204 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 PTGDR2Q9Y5Y4 395 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 HTR3EA5X5Y0 456 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 DPYSL4O14531 572 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 B4GAT1O43505 415 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ABCB7O75027 752 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 TULP3O75386 442 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 CAPN15O75808 1086 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 COL6A1P12109 1028 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 COX7A2P14406 83 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 HOXD12P35452 270 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SYTL3Q4VX76 610 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 PNPLA1Q8N8W4 532 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SLC35F5Q8WV83 523 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 CDK15Q96Q40 435 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 MLPHQ9BV36 600 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 BCO2Q9BYV7 579 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 MUC13Q9H3R2 512 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SAGE2PA6NJ88 616 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 H3BMQ9 156 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SCAMP3O14828 347 aaKnown RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ATE1O95260 518 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 CHRM5P08912 532 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ATP6V0D1P61421 351 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SREBF2Q12772 1141 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 TMEM236Q5W0B7 351 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 DCLRE1AQ6PJP8 1040 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SLC2A7Q6PXP3 512 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 CTU1Q7Z7A3 348 aaKnown RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 TLK2Q86UE8 772 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ARMC8Q8IUR7 673 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SLC15A3Q8IY34 581 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 MZB1Q8WU39 189 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 COG8Q96MW5 612 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 VPS35Q96QK1 796 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 YTHDF1Q9BYJ9 559 aaKnown RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 PRRG3Q9BZD7 231 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 RNF38Q9H0F5 515 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ATP13A1Q9HD20 1204 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 EIF2B4Q9UI10 523 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms