RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DPCR1Q3MIW9 517 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 KHDC1Q4VXA5 237 aaKnown RBP10.21□□□□□ -0.77
SF3B3-204ENST00000563739 ALG1LQ6GMV1 187 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 DNAJC24Q6P3W2 148 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 TRIM72Q6ZMU5 477 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 FDCSPQ8NFU4 85 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 SNRNP40Q96DI7 357 aaKnown RBP10.21□□□□□ -0.77
SF3B3-204ENST00000563739 STAMBPL1Q96FJ0 436 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 SLC41A2Q96JW4 573 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 BARD1Q99728 777 aaKnown RBP10.21□□□□□ -0.77
SF3B3-204ENST00000563739 SLC25A23Q9BV35 468 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 EPB41L1Q9H4G0 881 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 ARFGAP3Q9NP61 516 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 NLRC4Q9NPP4 1024 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 TAB2Q9NYJ8 693 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 CNOT8Q9UFF9 292 aaKnown RBP10.21□□□□□ -0.77
SF3B3-204ENST00000563739 PCDHB3Q9Y5E6 796 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 MDC1Q14676 2089 aaKnown RBP10.21□□□□□ -0.78
SF3B3-204ENST00000563739 A0A1W2PQ67 120 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 TOX3O15405 576 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 NUAK1O60285 661 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 SNX2O60749 519 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 CLDN7O95471 211 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 CALB1P05937 261 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF8P17098 575 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 NELFEP18615 380 aaKnown RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 XRCC1P18887 633 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ELAVL4P26378 380 aaKnown RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 PTPN4P29074 926 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 HNRNPH3P31942 346 aaKnown RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 NSFP46459 744 aaKnown RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ITGA1P56199 1179 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 POLR2FP61218 127 aaKnown RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 PEX6Q13608 980 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF235Q14590 738 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 FAM182AQ5T1J6 154 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 TXNRD3NBQ6F5E7 133 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 C11orf96Q7Z7L8 435 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 SLC9B2Q86UD5 537 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 PLXDC1Q8IUK5 500 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF547Q8IVP9 402 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 TMEM151BQ8IW70 566 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 MCOLN2Q8IZK6 566 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 TEX26Q8N6G2 289 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 GPR150Q8NGU9 434 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 PRR7Q8TB68 274 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 TDRD1Q9BXT4 1180 aaKnown RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ING2Q9H160 280 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 RTN4Q9NQC3 1192 aaKnown RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 FAM207AQ9NSI2 230 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-204ENST00000563739 LMBRD1Q9NUN5 540 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ASF1BQ9NVP2 202 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 ATXN10Q9UBB4 475 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 PCSK1NQ9UHG2 260 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 TMPRSS11EQ9UL52 423 aa10.2□□□□□ -0.78
SF3B3-204ENST00000563739 MED13LQ71F56 2210 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 SEC16AO15027 2179 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 DOCK10Q96BY6 2186 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF469Q96JG9 3925 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-204ENST00000563739 OR52A4PA6NMU1 304 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 GOLGA6L22H0YM25 854 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 E2F3O00716 465 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 CHUKO15111 745 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 LRCH4O75427 683 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 UBXN7O94888 489 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 EBLN1P0CF75 366 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 AMPD1P23109 780 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 IL4RP24394 825 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 MIPP30301 263 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 CASP14P31944 242 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 RENBPP51606 427 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 CCL11P51671 97 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 NIPAL4Q0D2K0 466 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 GPR18Q14330 331 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 CHRNA6Q15825 494 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 CAMK4Q16566 473 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 KRTAP21-3Q3LHN1 58 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 ARMC12Q5T9G4 340 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 PRAMEF17Q5VTA0 474 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 PLEKHA7Q6IQ23 1121 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 FAM198BQ6UWH4 519 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 FAM92BQ6ZTR7 304 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 USP45Q70EL2 814 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 SYVN1Q86TM6 617 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 RASGRP3Q8IV61 690 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 AOPEPQ8N6M6 819 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 EXD1Q8NHP7 514 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 ARRDC2Q8TBH0 407 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 PNPLA2Q96AD5 504 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 SH3KBP1Q96B97 665 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 LYSMD1Q96S90 227 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 UNKQ9C0B0 810 aaKnown RBP10.19□□□□□ -0.78
SF3B3-204ENST00000563739 EPHA6Q9UF33 1036 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 ZNHIT2Q9UHR6 403 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 PADI1Q9ULC6 663 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 ZGRF1Q86YA3 2104 aa10.19□□□□□ -0.78
SF3B3-204ENST00000563739 GRID2O43424 1007 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 ASMTLO95671 621 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 MMP2P08253 660 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms