RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 THRBP10828 461 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 HTR1EP28566 365 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 PRDX3P30048 256 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 SCNN1GP51170 649 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 ALDH3A2P51648 485 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 EIF4EBP2Q13542 120 aaPredicted RBP13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 SEMA3AQ14563 771 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 RBBP7Q16576 425 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 OR13C4Q8NGS5 318 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 HASPINQ8TF76 798 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 PSMG2Q969U7 264 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 TMEM209Q96SK2 561 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 CYP2S1Q96SQ9 504 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 RAD21L1Q9H4I0 556 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 INIPQ9NRY2 104 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 SEPT3Q9UH03 358 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 ZNF639Q9UID6 485 aa13.87□□□□□ -0.19
VPS9D1-202ENST00000561976 ABCB7O75027 752 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 DDNO94850 711 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 ODC1P11926 461 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 CDH1P12830 882 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 NR4A1P22736 598 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 ARL1P40616 181 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 CACNB2Q08289 660 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 DAG1Q14118 895 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 PRAMEF19Q5SWL8 479 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 NIPAL1Q6NVV3 410 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 SLC2A7Q6PXP3 512 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 R3HCC1LQ7Z5L2 792 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 THAP5Q7Z6K1 395 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 TMCO5AQ8N6Q1 288 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 FNDC5Q8NAU1 212 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 CCDC138Q96M89 665 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 ACOX2Q99424 681 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 TINF2Q9BSI4 451 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 LRRC3Q9BY71 257 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 CATSPERZQ9NTU4 200 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 OSER1Q9NX31 292 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 ERGIC3Q9Y282 383 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 KERAO60938 352 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 IL7RP16871 459 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 JUNBP17275 347 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 HOXB8P17481 243 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 NFKBIAP25963 317 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 GRIK1P39086 918 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 MLLT6P55198 1093 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 PLIN5Q00G26 463 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 TUBA3CQ13748 450 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 POLD3Q15054 466 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 TSNQ15631 228 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 IMPG1Q17R60 797 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 PAQR3Q6TCH7 311 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 C8orf59Q8N0T1 100 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 PDPRQ8NCN5 879 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 ITFG1Q8TB96 612 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 BPIFB1Q8TDL5 484 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 SDCCAG3Q96C92 435 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 PPM1MQ96MI6 270 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 SYTL2Q9HCH5 934 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 DGKBQ9Y6T7 804 aa13.86□□□□□ -0.19
VPS9D1-202ENST00000561976 SOBPA7XYQ1 873 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 H0Y858 1186 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 GMNNO75496 209 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ECI2O75521 394 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 SULT1C4O75897 302 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 B3GAT3O94766 335 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 PRSS56P0CW18 603 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 FMO4P31512 558 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 BRCC3P46736 316 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 AGTR2P50052 363 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 EMX2Q04743 252 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 TRIM16LQ309B1 348 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 FAM98BQ52LJ0 330 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 XAF1Q6GPH4 301 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 NCCRP1Q6ZVX7 275 aaPredicted RBP13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 SYVN1Q86TM6 617 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 DCBLD1Q8N8Z6 715 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 SGCDQ92629 289 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 KIAA1191Q96A73 305 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ESAMQ96AP7 390 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ZNF599Q96NL3 588 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 AARSD1Q9BTE6 412 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 HGH1Q9BTY7 390 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 DGCR6LQ9BY27 220 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 NTN4Q9HB63 628 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 HPS4Q9NQG7 708 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 TLR9Q9NR96 1032 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 RIC8BQ9NVN3 520 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 MAGEL2Q9UJ55 1249 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 C16orf96A6NNT2 1141 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ENPP3O14638 875 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 GJB3O75712 270 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 CNTN5O94779 1100 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ENO2P09104 434 aaPredicted RBP13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ATXN1LP0C7T5 689 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 TCF3P15923 654 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 MTHFRP42898 656 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms