RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CRADDP78560 199 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 B4GALNT1Q00973 533 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 TMEM115Q12893 351 aaPredicted RBP13.73□□□□□ -0.21
TPM1-230ENST00000561266 CAMK2BQ13554 666 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 SEPT6Q14141 434 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 HLTFQ14527 1009 aaKnown RBP eCLIP13.73□□□□□ -0.21
TPM1-230ENST00000561266 GPRC6AQ5T6X5 926 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 HES3Q5TGS1 186 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 XKR5Q6UX68 686 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 CCNI2Q6ZMN8 369 aaPredicted RBP13.73□□□□□ -0.21
TPM1-230ENST00000561266 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 GALNT13Q8IUC8 556 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 SDR16C5Q8N3Y7 309 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 ARL10Q8N8L6 244 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 ZNF398Q8TD17 642 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 ZDHHC1Q8WTX9 485 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 GATA6Q92908 595 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 CCDC74AQ96AQ1 378 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 CAPZA3Q96KX2 299 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 GSDMCQ9BYG8 508 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 FEZ2Q9UHY8 353 aaPredicted RBP13.73□□□□□ -0.21
TPM1-230ENST00000561266 RNF215Q9Y6U7 377 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 A6NCN8 305 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 ERI2A8K979 691 aaKnown RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 AGAP14A8MT82 685 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 C1QTNF9BB2RNN3 333 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 CES2O00748 559 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 PHF2O75151 1096 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 ECEL1O95672 775 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 CRTAMO95727 393 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 BASP1P80723 227 aaKnown RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 CDH17Q12864 832 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 ILF3Q12906 894 aaKnown RBP eCLIP13.72□□□□□ -0.21
TPM1-230ENST00000561266 KCNJ11Q14654 390 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 PHYKPLQ8IUZ5 450 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 PIANPQ8IYJ0 282 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 DDHD1Q8NEL9 900 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 OR13J1Q8NGT2 312 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 CNTNAP3BQ96NU0 1288 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 NAPGQ99747 312 aaPredicted RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 CNTNAP3Q9BZ76 1288 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 DDX47Q9H0S4 455 aaKnown RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 ASB8Q9H765 288 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 HOMER3Q9NSC5 361 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 NLE1Q9NVX2 485 aaPredicted RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 SCHIP1Q9P0W5 487 aaPredicted RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 MSRB2Q9Y3D2 182 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 NEUROG3Q9Y4Z2 214 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 ACACBO00763 2458 aa13.72□□□□□ -0.21
TPM1-230ENST00000561266 MAP1BP46821 2468 aaKnown RBP13.72□□□□□ -0.21
TPM1-230ENST00000561266 A0A1W2PQM1 296 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 E7EVH7 732 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 PPM1DO15297 605 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 PPFIA2O75334 1257 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 AVILO75366 819 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 TMEM63AO94886 807 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 CDK14O94921 469 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 MC4RP32245 332 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 ACTN2P35609 894 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 PTGIRP43119 386 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 LMAN1P49257 510 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 CCL7P80098 99 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 GPS1Q13098 491 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 TARDBPQ13148 414 aaKnown RBP eCLIP13.71□□□□□ -0.21
TPM1-230ENST00000561266 ILKQ13418 452 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 NFATC2Q13469 925 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 C14orf28Q4W4Y0 310 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 PPP1R21Q6ZMI0 780 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 DET1Q7L5Y6 550 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 TMPRSS9Q7Z410 1059 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 LINC00523Q86TU6 105 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 AGGF1Q8N302 714 aaeCLIP13.71□□□□□ -0.21
TPM1-230ENST00000561266 ARL14Q8N4G2 192 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 BEND7Q8N7W2 519 aaPredicted RBP13.71□□□□□ -0.21
TPM1-230ENST00000561266 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 GDAP1Q8TB36 358 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 SCG3Q8WXD2 468 aaKnown RBP13.71□□□□□ -0.21
TPM1-230ENST00000561266 CPT1BQ92523 772 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 CCDC3Q9BQI4 270 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 RMI1Q9H9A7 625 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 PRDM8Q9NQV8 689 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 EIF2B3Q9NR50 452 aaKnown RBP13.71□□□□□ -0.21
TPM1-230ENST00000561266 KLC4Q9NSK0 619 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 SMOXQ9NWM0 555 aa13.71□□□□□ -0.21
TPM1-230ENST00000561266 IGF2RP11717 2491 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 TRBV5-4A0A0C4DH59 114 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 PRAMEF33A0A0G2JMD5 474 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 CCDC162PA2VCL2 907 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 OR2AG2A6NM03 316 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 H7C0S8 307 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 B4GAT1O43505 415 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms