RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 ART4Q93070 314 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 FAM149B1Q96BN6 582 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 IGSF21Q96ID5 467 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 C8orf48Q96LL4 319 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 NEU1Q99519 415 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
AP4E1-204ENST00000561004 MYOCQ99972 504 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 CALN1Q9BXU9 219 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 DHX35Q9H5Z1 703 aaKnown RBP4.79□□□□□ -1.64
AP4E1-204ENST00000561004 POPDC2Q9HBU9 364 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 PNPLA8Q9NP80 782 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 DMAP1Q9NPF5 467 aaPredicted RBP4.79□□□□□ -1.64
AP4E1-204ENST00000561004 CNGB3Q9NQW8 809 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 MAN1C1Q9NR34 630 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 FAM114A2Q9NRY5 505 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.79□□□□□ -1.64
AP4E1-204ENST00000561004 FBXO34Q9NWN3 711 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 FBXW11Q9UKB1 542 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 MTUS1Q9ULD2 1270 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 NEU3Q9UQ49 428 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 USP15Q9Y4E8 981 aaPredicted RBP4.79□□□□□ -1.64
AP4E1-204ENST00000561004 PCDHB1Q9Y5F3 818 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 NR2E3Q9Y5X4 410 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 NFS1Q9Y697 457 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 PIKFYVEQ9Y2I7 2098 aa4.79□□□□□ -1.64
AP4E1-204ENST00000561004 ATG2BQ96BY7 2078 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DENND4AQ7Z401 1863 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 SYNJ2BP-COX16A0A087WUM0 186 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 GOLGA6L10A0A0M3HER8 536 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 CENPVL1A0A0U1RR11 272 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 TCRBV7S3A2A0A539 114 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 OR6C75A6NL08 312 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ZNF487B1APH4 448 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 APOC4-APOC2K7ER74 178 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 TRAPPC3O43617 180 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ERLIN1O75477 346 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 NCR1O76036 304 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ABLIM3O94929 683 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 KRT14P02533 472 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 APOC2P02655 101 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 HMGA1P17096 107 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 GOT1P17174 413 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 TYRP1P17643 537 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ATF6P18850 670 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 MCM3P25205 808 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 OR1D2P34982 312 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 RDXP35241 583 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 RPL22P35268 128 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 MAGEA11P43364 429 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 VPS41P49754 854 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 PLTPP55058 493 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 SNX16P57768 344 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 HTRA4P83105 476 aaPredicted RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ROR1Q01973 937 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DSC2Q02487 901 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 GBE1Q04446 702 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DEUP1Q05D60 604 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 NME3Q13232 169 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 CUL1Q13616 776 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 IL10RAQ13651 578 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 BYSLQ13895 437 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DPYSQ14117 519 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 PDK2Q15119 407 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 MAPRE1Q15691 268 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 UAP1L1Q3KQV9 507 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 PABPC1LQ4VXU2 614 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 BOLA3Q53S33 107 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ANKRD22Q5VYY1 191 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 NCBP2-AS2Q69YL0 99 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 SLC8B1Q6J4K2 584 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 CCDC70Q6NSX1 233 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 HIBCHQ6NVY1 386 aaPredicted RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 MSANTD2Q6P1R3 559 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 EMBQ6PCB8 327 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 VSTM1Q6UX27 236 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 C4orf50Q6ZRC1 276 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 BEND5Q7L4P6 421 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 SCN4BQ8IWT1 228 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DCP1BQ8IZD4 617 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 NUP93Q8N1F7 819 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 LRRC43Q8N309 656 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 PRR18Q8N4B5 295 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 CCDC33Q8N5R6 958 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 FITM2Q8N6M3 262 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DQX1Q8TE96 717 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 FUBP1Q96AE4 644 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 BOD1Q96IK1 185 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ZIM3Q96PE6 472 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 CSPG4P5Q96PW8 444 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DMRTA2Q96SC8 542 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 TMEM121Q9BTD3 319 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 TEX101Q9BY14 249 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 MRPL9Q9BYD2 267 aaKnown RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 DNAI2Q9GZS0 605 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 TMEM74BQ9NUR3 256 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 ARGLU1Q9NWB6 273 aaPredicted RBP4.78□□□□□ -1.64
AP4E1-204ENST00000561004 COX16Q9P0S2 106 aa4.78□□□□□ -1.64
AP4E1-204ENST00000561004 MTRRQ9UBK8 725 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms