RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 LRRC45Q96CN5 670 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 DNAJC1Q96KC8 554 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 DPEP2Q9H4A9 486 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 EVA1BQ9NVM1 165 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 SLC23A2Q9UGH3 650 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 MAP1BP46821 2468 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 MYLKQ15746 1914 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 ZFC3H1O60293 1989 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 COL27A1Q8IZC6 1860 aaPredicted RBP15.08■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNF106Q9H2Y7 1883 aaKnown RBP15.08■□□□□ 0.01
SNRPA1-213ENST00000560856 BPTFQ12830 3046 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 A6NCN8 305 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 B4DGG1 531 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 H7C0S8 307 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 CCL22O00626 93 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 SRP72O76094 671 aaKnown RBP15.08■□□□□ 0
SNRPA1-213ENST00000560856 CDK14O94921 469 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 PRAMEF1O95521 474 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 COILP38432 576 aaPredicted RBP15.08■□□□□ 0
SNRPA1-213ENST00000560856 CLCNKAP51800 687 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 GNG11P61952 73 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 PDE1BQ01064 536 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 CDH17Q12864 832 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 ITGA9Q13797 1035 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 POU6F1Q14863 301 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 GPRC6AQ5T6X5 926 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 C4orf22Q6V702 233 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 CHST15Q7LFX5 561 aaPredicted RBP15.08■□□□□ 0
SNRPA1-213ENST00000560856 C11orf96Q7Z7L8 435 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 DCBLD1Q8N8Z6 715 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 ZDHHC1Q8WTX9 485 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 CNTNAP3BQ96NU0 1288 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 CNTNAP3Q9BZ76 1288 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 EIF2B3Q9NR50 452 aaKnown RBP15.08■□□□□ 0
SNRPA1-213ENST00000560856 NLE1Q9NVX2 485 aaPredicted RBP15.08■□□□□ 0
SNRPA1-213ENST00000560856 APPL1Q9UKG1 709 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 UNC13CQ8NB66 2214 aa15.08■□□□□ 0
SNRPA1-213ENST00000560856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.07■□□□□ 0
SNRPA1-213ENST00000560856 NTN3O00634 580 aaPredicted RBP15.07■□□□□ 0
SNRPA1-213ENST00000560856 ECEL1O95672 775 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 MT-CO3P00414 261 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 APRTP07741 180 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 ACP5P13686 325 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 GLB1P16278 677 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 TCP1P17987 556 aaKnown RBP15.07■□□□□ 0
SNRPA1-213ENST00000560856 MAGEA6P43360 314 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 ARSDP51689 593 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 CTSCP53634 463 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 MAZP56270 477 aaKnown RBP15.07■□□□□ 0
SNRPA1-213ENST00000560856 TMPRSS15P98073 1019 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 TARDBPQ13148 414 aaKnown RBP eCLIP15.07■□□□□ 0
SNRPA1-213ENST00000560856 NFATC2Q13469 925 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 LDLRAP1Q5SW96 308 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 GSTA5Q7RTV2 222 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 ARL14Q8N4G2 192 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 RASGEF1AQ8N9B8 481 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 OR6C4Q8NGE1 309 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 STYXQ8WUJ0 223 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 CCDC74AQ96AQ1 378 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 CCDC97Q96F63 343 aaPredicted RBP15.07■□□□□ 0
SNRPA1-213ENST00000560856 CDKN2AIPNLQ96HQ2 116 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 NAP1L3Q99457 506 aaPredicted RBP15.07■□□□□ 0
SNRPA1-213ENST00000560856 CCDC3Q9BQI4 270 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 ASB8Q9H765 288 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 TBC1D29Q9UFV1 150 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 KCNK6Q9Y257 313 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 RNF215Q9Y6U7 377 aa15.07■□□□□ 0
SNRPA1-213ENST00000560856 EPG5Q9HCE0 2579 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 TRBV5-4A0A0C4DH59 114 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 TCRBV7S3A2A0A539 114 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 C1QTNF9BB2RNN3 333 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 E7EVH7 732 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 SGTAO43765 313 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 C1QTNF9P0C862 333 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 JUPP14923 745 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 PNLIPP16233 465 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 ZNF7P17097 686 aaPredicted RBP15.06■□□□□ 0
SNRPA1-213ENST00000560856 HADHAP40939 763 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 CDKN1CP49918 316 aaPredicted RBP15.06■□□□□ 0
SNRPA1-213ENST00000560856 B4GALNT1Q00973 533 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 TRIP13Q15645 432 aaPredicted RBP15.06■□□□□ 0
SNRPA1-213ENST00000560856 CCDC38Q502W7 563 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 CRTC3Q6UUV7 619 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 ZNF534Q76KX8 674 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 ZNF438Q7Z4V0 828 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 LRRTM4Q86VH4 590 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 CREG2Q8IUH2 290 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 C17orf53Q8N3J3 647 aaPredicted RBP15.06■□□□□ 0
SNRPA1-213ENST00000560856 GDAP1Q8TB36 358 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 MAPK15Q8TD08 544 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 ZNF778Q96MU6 729 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 RANBP9Q96S59 729 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 RIMKLBQ9ULI2 386 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 CLCA2Q9UQC9 943 aa15.06■□□□□ 0
SNRPA1-213ENST00000560856 APC2O95996 2303 aa15.05■□□□□ 0
SNRPA1-213ENST00000560856 ASPMQ8IZT6 3477 aa15.05■□□□□ -0
SNRPA1-213ENST00000560856 A0A1W2PQM1 296 aa15.05■□□□□ -0
SNRPA1-213ENST00000560856 KMOO15229 486 aa15.05■□□□□ -0
SNRPA1-213ENST00000560856 PPM1DO15297 605 aa15.05■□□□□ -0
SNRPA1-213ENST00000560856 B4GAT1O43505 415 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms