RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MT-ND3P03897 115 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 ANKRD34CP0C6C1 535 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 GJC1P36383 396 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 GARSP41250 739 aaKnown RBP10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 LEPRP48357 1165 aaKnown RBP10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 ARL4DP49703 201 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 CCL11P51671 97 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 DSC2Q02487 901 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 CHAF1BQ13112 559 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 IL11RAQ14626 422 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 CDKAL1Q5VV42 579 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 ALS2CLQ60I27 953 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 PLEKHA7Q6IQ23 1121 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 CYB5D1Q6P9G0 228 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 FAM92BQ6ZTR7 304 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 PPP1R3BQ86XI6 285 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 ARFGAP1Q8N6T3 406 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 ENOX1Q8TC92 643 aaKnown RBP10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 CT55Q8WUE5 264 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 CXorf40BQ96DE9 158 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 GBP4Q96PP9 640 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 CSPG4P5Q96PW8 444 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 PLEKHG4BQ96PX9 1271 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 SPATA16Q9BXB7 569 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 OR2AG1Q9H205 316 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 FAM83DQ9H4H8 585 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 ACTL8Q9H568 366 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 RMI1Q9H9A7 625 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 ACSS2Q9NR19 701 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 FANCLQ9NW38 375 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 LUZP4Q9P127 313 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 TRIM10Q9UDY6 481 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 G3BP2Q9UN86 482 aaKnown RBP10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 MYO9AB2RTY4 2548 aa10.35□□□□□ -0.75
CDC42BPB-207ENST00000560492 TMEM191CA6NGB0 347 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ARGFXA6NJG6 315 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 FADS2P1A8MWK0 482 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 SPAG6O75602 509 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 SLC25A14O95258 325 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 PEX11BO96011 259 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 FTLP02792 175 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 PDGFAP04085 211 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ATP1A3P13637 1013 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ZNF165P49910 485 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 RPS18P62269 152 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 RPS15P62841 145 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 PDE1BQ01064 536 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ASIC2Q16515 512 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 DPYSL2Q16555 572 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 NADK2Q4G0N4 442 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ANKRD20A8PQ5CZ79 823 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 CT47A1Q5JQC4 288 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ZNF569Q5MCW4 686 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 CCDC122Q5T0U0 273 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ZNF648Q5T619 568 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 TMEM26Q6ZUK4 368 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 CYP4V2Q6ZWL3 525 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 POLNQ7Z5Q5 900 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 SIDT2Q8NBJ9 832 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 TRIM55Q9BYV6 548 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 SLC29A3Q9BZD2 475 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 CARD9Q9H257 536 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ZNF768Q9H5H4 540 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 PCDH9Q9HC56 1237 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 MRPL47Q9HD33 250 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 PDE7BQ9NP56 450 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 SLAMF7Q9NQ25 335 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 RTN4Q9NQC3 1192 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 ATXN10Q9UBB4 475 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 PPIL1Q9Y3C6 166 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 SLC30A1Q9Y6M5 507 aa10.34□□□□□ -0.75
CDC42BPB-207ENST00000560492 GOLGA6L22H0YM25 854 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 SMAPO00193 183 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 KIF1CO43896 1103 aaKnown RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 NUAK1O60285 661 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 SEMA7AO75326 666 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 C9P02748 559 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF8P17098 575 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 RPL10P27635 214 aaKnown RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 IL1R2P27930 398 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 SPINT3P49223 89 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 UBE2IP63279 158 aaKnown RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 TUBB3Q13509 450 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 SEMA5AQ13591 1074 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 EIF2S3LQ2VIR3 472 aaKnown RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 BOLA3Q53S33 107 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZFYVE27Q5T4F4 411 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 CPZQ66K79 652 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 TIGD7Q6NT04 549 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 NLRP8Q86W28 1048 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 SEC14L1Q92503 715 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 RSC1A1Q92681 617 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 TRIM11Q96F44 468 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZDHHC12Q96GR4 267 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 MLPHQ9BV36 600 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 TDRD1Q9BXT4 1180 aaKnown RBP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 LHX9Q9NQ69 397 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 RBM22Q9NW64 420 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 OGFRQ9NZT2 677 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms