RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PIANPQ8IYJ0 282 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 CBARPQ8N350 705 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 CARNMT1Q8N4J0 409 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 MARVELD2Q8N4S9 558 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 EFCAB3Q8N7B9 438 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 EFHBQ8N7U6 833 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 PNPLA1Q8N8W4 532 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 HIPK4Q8NE63 616 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 BHLHE22Q8NFJ8 381 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 ADAMTS19Q8TE59 1207 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 TRPC4APQ8TEL6 797 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 SPDL1Q96EA4 605 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 LINGO1Q96FE5 620 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 DCUN1D1Q96GG9 259 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 EXOC2Q96KP1 924 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 C3orf30Q96M34 536 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 UHRF1Q96T88 793 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 GPATCH1Q9BRR8 931 aaKnown RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 EFHD1Q9BUP0 239 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 GPR63Q9BZJ6 419 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 TRIM15Q9C019 465 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 BRINP2Q9C0B6 783 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 EBF3Q9H4W6 596 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 SDR39U1Q9NRG7 319 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 RIC8BQ9NVN3 520 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 ADA2Q9NZK5 511 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 ABCD2Q9UBJ2 740 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 VPS51Q9UID3 782 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 APPL1Q9UKG1 709 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 TBX21Q9UL17 535 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 FAM50BQ9Y247 325 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 TNPO3Q9Y5L0 923 aaKnown RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 C15orf38-AP3S2A0A0A6YYH1 394 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 A0A0J9YYE9 177 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 AQP12BA6NM10 295 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 EIF3FO00303 357 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CDC7O00311 574 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 BTN3A1O00481 513 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 SNX2O60749 519 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 NIPSNAP2O75323 286 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CRCPO75575 148 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 UPP2O95045 317 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 IGSF6O95976 241 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TRBC1P01850 177 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 S100BP04271 92 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CYBBP04839 570 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PRSS56P0CW18 603 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 VCLP18206 1134 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ITGALP20701 1170 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 SLC7A1P30825 629 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CSKP41240 450 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 RGS4P49798 205 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ERFP50548 548 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CLCN7P51798 805 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 AQP4P55087 323 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CDH13P55290 713 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ERVK-8P63133 956 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 BCL2L1Q07817 233 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CDH18Q13634 790 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 RPS6KA2Q15349 733 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 KIF19Q2TAC6 998 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 SMU1Q2TAY7 513 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 MAP7D1Q3KQU3 841 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 GPR33Q49SQ1 333 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PDCD4Q53EL6 469 aaKnown RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TTC23LQ6PF05 361 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PAOXQ6QHF9 649 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PRR23BQ6ZRT6 265 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 GPRIN3Q6ZVF9 776 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TAS2R42Q7RTR8 314 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 SNX20Q7Z614 316 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ARPINQ7Z6K5 226 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 DEFB128Q7Z7B8 93 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 SPATA24Q86W54 205 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 AQP12AQ8IXF9 295 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 DDIASQ8IXT1 998 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ST13P4Q8IZP2 240 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 RBFAQ8N0V3 343 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PCDH20Q8N6Y1 951 aaKnown RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PDPRQ8NCN5 879 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PIH1D2Q8WWB5 315 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 MRPS31Q92665 395 aaKnown RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TUBGCP3Q96CW5 907 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 NSUN5Q96P11 429 aaKnown RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 LYSMD1Q96S90 227 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ZBED2Q9BTP6 218 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TMEM106CQ9BVX2 250 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TRIM54Q9BYV2 358 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 CLPBQ9H078 707 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 TUBB1Q9H4B7 451 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 FBRSL1Q9HCM7 1045 aaKnown RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ZNF334Q9HCZ1 680 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 LATS2Q9NRM7 1088 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 MRPL17Q9NRX2 175 aaKnown RBP8.01□□□□□ -1.13
SMAD3-212ENST00000559937 ABCB8Q9NUT2 735 aa8.01□□□□□ -1.13
SMAD3-212ENST00000559937 AIG1Q9NVV5 245 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms