RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 DDHD1Q8NEL9 900 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 FBXO25Q8TCJ0 367 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 FCRL3Q96P31 734 aaPredicted RBP17.27■□□□□ 0.35
TPM1-214ENST00000558544 LRRC61Q9BV99 259 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 SLC13A1Q9BZW2 595 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 TRIM39Q9HCM9 518 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 VPS18Q9P253 973 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 CHMP2BQ9UQN3 213 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 PCYT1BQ9Y5K3 369 aaPredicted RBP17.27■□□□□ 0.35
TPM1-214ENST00000558544 RPS6KL1Q9Y6S9 549 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 DGKBQ9Y6T7 804 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 TRBV5-4A0A0C4DH59 114 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 AGAP14A8MT82 685 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 BHMG1C9JSJ3 638 aaPredicted RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 DNAJC6O75061 913 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 PIAS2O75928 621 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 IVLP07476 585 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 RHOXF2BP0C7M4 288 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 ZNF883P0CG24 379 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 ZNF8P17098 575 aaPredicted RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 PGAM1P18669 254 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 AKT1P31749 480 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 ELK3P41970 407 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 DRG2P55039 364 aaKnown RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 CAV1Q03135 178 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 PDIA2Q13087 525 aaKnown RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 GPR33Q49SQ1 333 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 ANKRD20A4Q4UJ75 823 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 KIAA0930Q6ICG6 404 aaPredicted RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 SERPINA9Q86WD7 417 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 IGDCC3Q8IVU1 814 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 PIANPQ8IYJ0 282 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 ZNF548Q8NEK5 533 aaPredicted RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 OR4L1Q8NH43 312 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 EBNA1BP2Q99848 306 aaKnown RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 RHOXF2Q9BQY4 288 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 WDR83Q9BRX9 315 aaKnown RBP17.26■□□□□ 0.35
TPM1-214ENST00000558544 FAM114A2Q9NRY5 505 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 UCKL1Q9NWZ5 548 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 IL1RAPL1Q9NZN1 696 aa17.26■□□□□ 0.35
TPM1-214ENST00000558544 PIEZO1Q92508 2521 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 ARHGEF17Q96PE2 2063 aaPredicted RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 ARID1BQ8NFD5 2236 aaPredicted RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 GOLGA8KD6RF30 607 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 E7ESA3 106 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 GOLGA8TH3BQL2 631 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 USP1O94782 785 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 VAPBO95292 243 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 CELA2BP08218 269 aaPredicted RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 CTSEP14091 401 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 PAMP19021 973 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 MSH3P20585 1137 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 ACRV1P26436 265 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 ARNTP27540 789 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 TMEM115Q12893 351 aaPredicted RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 C1orf61Q13536 156 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 FASTKD3Q14CZ7 662 aaKnown RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 FASTKD1Q53R41 847 aaKnown RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 PRRT3Q5FWE3 981 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 TEX35Q5T0J7 233 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 CENPUQ71F23 418 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 TMEM135Q86UB9 458 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 GALNT13Q8IUC8 556 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 ANKMY2Q8IV38 441 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 PNPLA1Q8N8W4 532 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 LMX1AQ8TE12 382 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 SAP25Q8TEE9 199 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.25■□□□□ 0.35
TPM1-214ENST00000558544 CCDC97Q96F63 343 aaPredicted RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 CFAP36Q96G28 342 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 SCARF2Q96GP6 870 aaPredicted RBP17.25■□□□□ 0.35
TPM1-214ENST00000558544 TMEM168Q9H0V1 697 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 CATSPERZQ9NTU4 200 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 SPASTQ9UBP0 616 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 PRKAB1Q9Y478 270 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 GPSM3Q9Y4H4 160 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 TEX264Q9Y6I9 313 aa17.25■□□□□ 0.35
TPM1-214ENST00000558544 ZCWPW2A0A1B0GU75 182 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 AQP9O43315 295 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 VEGFDO43915 354 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 NUAK1O60285 661 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 PCDHGA12O60330 932 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 CDK14O94921 469 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 POLBP06746 335 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 DGKAP23743 735 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 LIMK1P53667 647 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 GTF2H3Q13889 308 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 SEMA3AQ14563 771 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 CRYMQ14894 314 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 DBN1Q16643 649 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 PYCR3Q53H96 274 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 CRTC3Q6UUV7 619 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 DET1Q7L5Y6 550 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 KANSL1Q7Z3B3 1105 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 ZBED8Q8IZ13 594 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 OTUD6BQ8N6M0 293 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 FBXO36Q8NEA4 188 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 NETO1Q8TDF5 533 aa17.24■□□□□ 0.35
TPM1-214ENST00000558544 NAT14Q8WUY8 206 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms