RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 FECHP22830 423 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 LHCGRP22888 699 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ITGA3P26006 1051 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 GRNP28799 593 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 NSFP46459 744 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 ARL4DP49703 201 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 CLCNKAP51800 687 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ZNF143P52747 638 aaPredicted RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 RRADP55042 308 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 GFERP55789 205 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 CDR2Q01850 454 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ACY1Q03154 408 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 PTSQ03393 145 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ZNF235Q14590 738 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 MAN2A1Q16706 1144 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ZXDCQ2QGD7 858 aaPredicted RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 KRTAP21-3Q3LHN1 58 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 PLEKHN1Q494U1 663 aaPredicted RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 KLHDC7AQ5VTJ3 777 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 CPZQ66K79 652 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 SLC6A19Q695T7 634 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 PWWP2BQ6NUJ5 590 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 FAM199XQ6PEV8 388 aaPredicted RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 TRIM72Q6ZMU5 477 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 MED25Q71SY5 747 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ZNF765Q7L2R6 523 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 PRSS42Q7Z5A4 293 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 TSPAN33Q86UF1 283 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 TRIM74Q86UV6 250 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ZC3H18Q86VM9 953 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 PHYKPLQ8IUZ5 450 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 RAVER1Q8IY67 606 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 TMEM102Q8N9M5 508 aaPredicted RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 Q8NA96 180 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 GLIS1Q8NBF1 620 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 SIDT2Q8NBJ9 832 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 FDCSPQ8NFU4 85 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 SLC30A5Q8TAD4 765 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 NSMCE1Q8WV22 266 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 KLHL6Q8WZ60 621 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 UBXN4Q92575 508 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 MR1Q95460 341 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 SCAMP4Q969E2 229 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 RNF31Q96EP0 1072 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 COX14Q96I36 57 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 PLEKHG4BQ96PX9 1271 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 SMAD5Q99717 465 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 RAB33BQ9H082 229 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 NDST4Q9H3R1 872 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 NOD2Q9HC29 1040 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 WASH6PQ9NQA3 447 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 AGPAT4Q9NRZ5 378 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ASF1BQ9NVP2 202 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 GPR83Q9NYM4 423 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ADAM22Q9P0K1 906 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 EPHA6Q9UF33 1036 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 CD84Q9UIB8 345 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 DNPEPQ9ULA0 475 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 KCNK6Q9Y257 313 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 PRKAB1Q9Y478 270 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 COPG1Q9Y678 874 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 BOD1L1Q8NFC6 3051 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ITPR2Q14571 2701 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 NPIPB15A6NHN6 443 aaPredicted RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 SEC16AO15027 2179 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 LRRTM2O43300 516 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 CCP110O43303 1012 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 NUAK1O60285 661 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 SOD1P00441 154 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ATP1A1P05023 1023 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 RAB40ALP0C0E4 278 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 PRF1P14222 555 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 UCHL3P15374 230 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 CTPS1P17812 591 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ERCC2P18074 760 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 CES1P23141 567 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 PTGIRP43119 386 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 GLRBP48167 497 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 HCAR3P49019 387 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 VAV2P52735 878 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ZNF135P52742 658 aaPredicted RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 EPHB1P54762 984 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 GSCP56915 257 aaPredicted RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 GSDMDP57764 484 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 RPS18P62269 152 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 UBE2IP63279 158 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 CDK18Q07002 472 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ITKQ08881 620 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 SLC10A7Q0GE19 358 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 TUBB3Q13509 450 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 SYCP1Q15431 976 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 VWA3BQ502W6 1294 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ERMARDQ5T6L9 678 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 LYPLAL1Q5VWZ2 237 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 IZUMO3Q5VZ72 239 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 LRRC66Q68CR7 880 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 DPY19L2P1Q6NXN4 242 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 IRGCQ6NXR0 463 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 KLHL35Q6PF15 583 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 DCUN1D2Q6PH85 259 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms