RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 KIRREL2Q6UWL6 708 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 PACS1Q6VY07 963 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 RBM44Q6ZP01 1051 aaKnown RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 CENPUQ71F23 418 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 OTOAQ7RTW8 1153 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ZNF571Q7Z3V5 609 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 NANOGNBQ7Z5D8 188 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SATL1Q86VE3 508 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SFR1Q86XK3 245 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ERI1Q8IV48 349 aaKnown RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SDR16C5Q8N3Y7 309 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SIRT6Q8N6T7 355 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ICA1LQ8NDH6 482 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ABHD11Q8NFV4 315 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 CEP70Q8NHQ1 597 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 DTX3LQ8TDB6 740 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 U2AF1L4Q8WU68 220 aaKnown RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SCFD1Q8WVM8 642 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 RFFLQ8WZ73 363 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 CASP10Q92851 521 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ATP6V0A1Q93050 837 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 KIAA1191Q96A73 305 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 RSPRY1Q96DX4 576 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 HMCESQ96FZ2 354 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SNF8Q96H20 258 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 PRR11Q96HE9 360 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 CFAP57Q96MR6 1250 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 PRICKLE1Q96MT3 831 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 BIRC8Q96P09 236 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ARPC5LQ9BPX5 153 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 CIPCQ9C0C6 399 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 NACA2Q9H009 215 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 EBF3Q9H4W6 596 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 PARVBQ9HBI1 364 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ERVK-5Q9HDB9 667 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 MLXIPLQ9NP71 852 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 INIPQ9NRY2 104 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 TAS2R1Q9NYW7 299 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 STX8Q9UNK0 236 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 MAN2B2Q9Y2E5 1009 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SLC27A6Q9Y2P4 619 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 HBS1LQ9Y450 684 aaKnown RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.83□□□□□ -1.8
FOXN3-213ENST00000556916 FLT1P17948 1338 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 PHLPP1O60346 1717 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 COL24A1Q17RW2 1714 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ITGB4P16144 1822 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 CACNA1SQ13698 1873 aa3.83□□□□□ -1.8
FOXN3-213ENST00000556916 ZNF142P52746 1687 aaPredicted RBP3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TNRC6CQ9HCJ0 1690 aaKnown RBP3.82□□□□□ -1.8
FOXN3-213ENST00000556916 NHSL1Q5SYE7 1610 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 GLI3P10071 1580 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TCRBV5S1A1TA0A578 114 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 PSMD9O00233 223 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 BUD23O43709 281 aaKnown RBP3.82□□□□□ -1.8
FOXN3-213ENST00000556916 DKC1O60832 514 aaKnown RBP eCLIP3.82□□□□□ -1.81e-11■■■■■ 35.6
FOXN3-213ENST00000556916 ZBED4O75132 1171 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TRMUO75648 421 aaKnown RBP3.82□□□□□ -1.8
FOXN3-213ENST00000556916 KRT38O76015 456 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TM7SF2O76062 418 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TNFAIP8O95379 198 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 PLEKHA8P1O95397 391 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TGDSO95455 350 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ACSL3O95573 720 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 BAG2O95816 211 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ABHD2P08910 425 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 DLDP09622 509 aaKnown RBP3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ARP10275 920 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ZNF12P17014 697 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 VCLP18206 1134 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TNFAIP3P21580 790 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 CA4P22748 312 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 GABRB3P28472 473 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 PHBP35232 272 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 STAT1P42224 750 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 HALP42357 657 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TM4SF4P48230 202 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 NR1H2P55055 460 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 FOXG1P55316 489 aaPredicted RBP3.82□□□□□ -1.8
FOXN3-213ENST00000556916 NUP107P57740 925 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ARPC4P59998 168 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ACTR3P61158 418 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 HOXA4Q00056 320 aaPredicted RBP3.82□□□□□ -1.8
FOXN3-213ENST00000556916 RELAQ04206 551 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ZBTB16Q05516 673 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 CDC16Q13042 620 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 PPP2R5CQ13362 524 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 ITGA7Q13683 1181 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 UBE4AQ14139 1066 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 KRT81Q14533 505 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 LPIN1Q14693 890 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TMED2Q15363 201 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 GPR162Q16538 588 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 TMEM266Q2M3C6 531 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 SLC35G1Q2M3R5 365 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 EDRF1Q3B7T1 1238 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 MMEL1Q495T6 779 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 PXDC1Q5TGL8 231 aa3.82□□□□□ -1.8
FOXN3-213ENST00000556916 GRHL2Q6ISB3 625 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms