RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 RPLP0P05388 317 aaKnown RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 PROS1P07225 676 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 APRTP07741 180 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 CCDC173Q0VFZ6 552 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 TMEM115Q12893 351 aaPredicted RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 GTF2H3Q13889 308 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 KCTD19Q17RG1 926 aaPredicted RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 LDLRAP1Q5SW96 308 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 GPRC6AQ5T6X5 926 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 PPP1R21Q6ZMI0 780 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 LRRTM4Q86VH4 590 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 C17orf82Q86X59 251 aaPredicted RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 ZNF547Q8IVP9 402 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 ARL14Q8N4G2 192 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 Q8N9G6 341 aaPredicted RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 DNAAF3Q8N9W5 541 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 DDHD1Q8NEL9 900 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 DNAJC1Q96KC8 554 aaKnown RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 TTC25Q96NG3 672 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 DEPDC7Q96QD5 511 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 NAP1L3Q99457 506 aaPredicted RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 ASB8Q9H765 288 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
ACTN1-217ENST00000556203 SNX12Q9UMY4 172 aa15□□□□□ -0.01
ACTN1-217ENST00000556203 TRABD2BA6NFA1 517 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 RHPN2P1A8MT19 583 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 PGRMC1O00264 195 aaKnown RBP14.99□□□□□ -0.01
ACTN1-217ENST00000556203 KMOO15229 486 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 SNX2O60749 519 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 CSO75390 466 aaKnown RBP14.99□□□□□ -0.01
ACTN1-217ENST00000556203 TCEA3O75764 348 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 EML2O95834 649 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 GAS8O95995 478 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 PNLIPP16233 465 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 HADHAP40939 763 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 GRIA1P42261 906 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 CCL7P80098 99 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 BASP1P80723 227 aaKnown RBP14.99□□□□□ -0.01
ACTN1-217ENST00000556203 XIAPP98170 497 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 CDH17Q12864 832 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 NFATC2Q13469 925 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 BIRC2Q13490 618 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 SPIDRQ14159 915 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 INSCQ1MX18 579 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 C4orf22Q6V702 233 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 RBM44Q6ZP01 1051 aaKnown RBP14.99□□□□□ -0.01
ACTN1-217ENST00000556203 TRAPPC5Q8IUR0 188 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 CCNJLQ8IV13 435 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 RASGEF1AQ8N9B8 481 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 WDR48Q8TAF3 677 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 MAGOHBQ96A72 148 aaKnown RBP14.99□□□□□ -0.01
ACTN1-217ENST00000556203 C19orf43Q9BQ61 176 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 ZCCHC2Q9C0B9 1178 aaKnown RBP14.99□□□□□ -0.01
ACTN1-217ENST00000556203 LRRN3Q9H3W5 708 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 OSGEPL1Q9H4B0 414 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 KLC4Q9NSK0 619 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 TBC1D29Q9UFV1 150 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 SLC23A2Q9UGH3 650 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 PCDHB1Q9Y5F3 818 aa14.99□□□□□ -0.01
ACTN1-217ENST00000556203 TRBV23OR9-2A0A075B6M9 112 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 A0A1W2PQM1 296 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 CCDC78A2IDD5 438 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 TMEM8BA6NDV4 472 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 NTN3O00634 580 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-217ENST00000556203 ZNF185O15231 689 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 ZNF7P17097 686 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-217ENST00000556203 MSH3P20585 1137 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 ITGALP20701 1170 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 AKT1P31749 480 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 MC4RP32245 332 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 GNG11P61952 73 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 TRIP13Q15645 432 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-217ENST00000556203 CCDC38Q502W7 563 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 TTC27Q6P3X3 843 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 SPRED1Q7Z699 444 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 ACTRT1Q8TDG2 376 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 STYXQ8WUJ0 223 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 ZCCHC14Q8WYQ9 949 aaKnown RBP14.98□□□□□ -0.01
ACTN1-217ENST00000556203 TIMM29Q9BSF4 260 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 FAM96AQ9H5X1 160 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 CASS4Q9NQ75 786 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 EIF2B3Q9NR50 452 aaKnown RBP14.98□□□□□ -0.01
ACTN1-217ENST00000556203 NLE1Q9NVX2 485 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-217ENST00000556203 CRLS1Q9UJA2 301 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 DNAJC16Q9Y2G8 782 aa14.98□□□□□ -0.01
ACTN1-217ENST00000556203 GOLGA4Q13439 2230 aaKnown RBP14.98□□□□□ -0.01
ACTN1-217ENST00000556203 PTPRBP23467 1997 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 SCN8AQ9UQD0 1980 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 A6NCN8 305 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 MROH6A6NGR9 719 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 OR2AG2A6NM03 316 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 CES2O00748 559 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 VPS41P49754 854 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 CLCNKAP51800 687 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 CTSCP53634 463 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 ST3GAL2Q16842 350 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 ISXQ2M1V0 245 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 IYDQ6PHW0 289 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 MICALCLQ6ZW33 695 aa14.97□□□□□ -0.01
ACTN1-217ENST00000556203 DET1Q7L5Y6 550 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms