RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-205ENST00000555227 VPS28Q9UK41 221 aa4.25□□□□□ -1.73
LINC01578-205ENST00000555227 TTC7AQ9ULT0 858 aaPredicted RBP4.25□□□□□ -1.73
LINC01578-205ENST00000555227 GPR34Q9UPC5 381 aa4.25□□□□□ -1.73
LINC01578-205ENST00000555227 AAR2Q9Y312 384 aaKnown RBP4.25□□□□□ -1.73
LINC01578-205ENST00000555227 A6NCN8 305 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 EIF2S1P05198 315 aaKnown RBP4.24□□□□□ -1.73
LINC01578-205ENST00000555227 PAX1P15863 534 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 IL7RP16871 459 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 GABRB2P47870 512 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 F2RL1P55085 397 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 FGFBP1Q14512 234 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 MTSS1LQ765P7 747 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 SLC35F3Q8IY50 421 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 TTC39CQ8N584 583 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 ADAD2Q8NCV1 583 aaKnown RBP4.24□□□□□ -1.73
LINC01578-205ENST00000555227 SCFD2Q8WU76 684 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 PSPC1Q8WXF1 523 aaKnown RBP4.24□□□□□ -1.73
LINC01578-205ENST00000555227 LITAFQ99732 161 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 CMKLR1Q99788 373 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 SH3GL2Q99962 352 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 SYT17Q9BSW7 474 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 TKTL2Q9H0I9 626 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 GHITMQ9H3K2 345 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 SYNCQ9H7C4 482 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 POLR1BQ9H9Y6 1135 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 DDX4Q9NQI0 724 aaKnown RBP4.24□□□□□ -1.73
LINC01578-205ENST00000555227 RRP7BPQ9NSQ0 103 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 HCFC1R1Q9NWW0 138 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 HAO1Q9UJM8 370 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 ERVK-11Q9UQG0 969 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 LOXL2Q9Y4K0 774 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 LSM4Q9Y4Z0 139 aaKnown RBP4.24□□□□□ -1.73
LINC01578-205ENST00000555227 SMAD5-AS1Q9Y6J3 95 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 STON1Q9Y6Q2 735 aa4.24□□□□□ -1.73
LINC01578-205ENST00000555227 LIPT2A6NK58 231 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 PTGES3LE9PB15 166 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 BLOC1S5-TXNDC5H3BN57 136 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 PAGE4O60829 102 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 RARGP13631 454 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 BDKRB2P30411 391 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 CDAP32320 146 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 HADHAP40939 763 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 PIP4K2AP48426 406 aaPredicted RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 CCDC96Q2M329 555 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 SIRPB2Q5JXA9 342 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 SFMBT2Q5VUG0 894 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 METTL2BQ6P1Q9 378 aaKnown RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 LINGO2Q7L985 606 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 C1orf87Q8N0U7 546 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 WDTC1Q8N5D0 677 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 HUS1BQ8NHY5 278 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 DUSP19Q8WTR2 217 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 ARHGEF2Q92974 986 aaKnown RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 MMABQ96EY8 250 aaPredicted RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 METTL2AQ96IZ6 378 aaKnown RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 ZNF354BQ96LW1 612 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 MTERF1Q99551 399 aaKnown RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 POLR3CQ9BUI4 534 aaPredicted RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 STRA6Q9BX79 667 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 SH2D4AQ9H788 454 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 KAT14Q9H8E8 782 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 ADD3Q9UEY8 706 aaKnown RBP4.23□□□□□ -1.73
LINC01578-205ENST00000555227 KCNK7Q9Y2U2 307 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 LYVE1Q9Y5Y7 322 aa4.23□□□□□ -1.73
LINC01578-205ENST00000555227 A0A1B0GVY2 172 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 A0A1W2PQF6 199 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 MYO1GB0I1T2 1018 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 K7ENM7 598 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 SEC14L5O43304 696 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 EXTL3O43909 919 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 NKX2-2O95096 273 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 ALOX12P18054 663 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 AMPHP49418 695 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 MMP14P50281 582 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 HNRNPH2P55795 449 aaKnown RBP4.22□□□□□ -1.73
LINC01578-205ENST00000555227 SNX16P57768 344 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 MC1RQ01726 317 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 CSTF3Q12996 717 aaKnown RBP4.22□□□□□ -1.73
LINC01578-205ENST00000555227 GAGE5Q13069 117 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 GAGE6Q13070 117 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 TMEM154Q6P9G4 183 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 SLC27A1Q6PCB7 646 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 STXBP4Q6ZWJ1 553 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 CCDC13Q8IYE1 715 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 POMGNT1Q8WZA1 660 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 NUDT16L1Q9BRJ7 211 aaKnown RBP4.22□□□□□ -1.73
LINC01578-205ENST00000555227 FSD1Q9BTV5 496 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 PLEKHA4Q9H4M7 779 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 PPP1R3EQ9H7J1 279 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 MKKSQ9NPJ1 570 aaPredicted RBP4.22□□□□□ -1.73
LINC01578-205ENST00000555227 ASAH2Q9NR71 780 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 DLGAP2Q9P1A6 1054 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 ZNF215Q9UL58 517 aaPredicted RBP4.22□□□□□ -1.73
LINC01578-205ENST00000555227 RABGAP1Q9Y3P9 1069 aa4.22□□□□□ -1.73
LINC01578-205ENST00000555227 TP53BP1Q12888 1972 aaPredicted RBP4.22□□□□□ -1.73
LINC01578-205ENST00000555227 VILLO15195 856 aa4.21□□□□□ -1.74
LINC01578-205ENST00000555227 AHCYL1O43865 530 aa4.21□□□□□ -1.74
LINC01578-205ENST00000555227 IPO7O95373 1038 aaKnown RBP4.21□□□□□ -1.74
LINC01578-205ENST00000555227 HOXB5P09067 269 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms