RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 PTTG2Q9NZH5 202 aa11.1□□□□□ -0.63
SRP54-205ENST00000554803 TMEM216Q9P0N5 145 aa11.1□□□□□ -0.63
SRP54-205ENST00000554803 UXTQ9UBK9 157 aaPredicted RBP11.1□□□□□ -0.63
SRP54-205ENST00000554803 TMCO1Q9UM00 188 aa11.1□□□□□ -0.63
SRP54-205ENST00000554803 CDYLQ9Y232 598 aa11.1□□□□□ -0.63
SRP54-205ENST00000554803 COL12A1Q99715 3063 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 TMEM131Q92545 1883 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 A0A087X1B8 175 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 YJEFN3A6XGL0 299 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 G3V2L1 256 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 H3BNX3 289 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 ITM2AO43736 263 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 CACNG3O60359 315 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 ANXA9O76027 345 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 DKK1O94907 266 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 PRKCGP05129 697 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 TFE3P19532 575 aaPredicted RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 PSMB4P28070 264 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 ADRA1BP35368 520 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 SLC26A3P40879 764 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 TUBP50607 506 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 SESN2P58004 480 aaPredicted RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 MRPS21P82921 87 aaKnown RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 SLC25A3Q00325 362 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 CFHR1Q03591 330 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 GALNT2Q10471 571 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 TRAP1Q12931 704 aaKnown RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 STX5Q13190 355 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 MSLNQ13421 630 aaPredicted RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 CYLC2Q14093 348 aaPredicted RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 PDK3Q15120 406 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 TRIP10Q15642 601 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 RAB6CQ53S08 254 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 RNF220Q5VTB9 566 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 ZCCHC23Q6ZST2 131 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 PID1Q7Z2X4 250 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 TMEM150AQ86TG1 271 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 DEFB106AQ8N104 65 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 CCDC185Q8N715 623 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 CCNYQ8ND76 341 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 DUS3LQ96G46 650 aaKnown RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 SPATA17Q96L03 361 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 GORASP1Q9BQQ3 440 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 HAUS8Q9BT25 410 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 TRMOQ9BU70 441 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 RAB6CQ9H0N0 254 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 ZNF385DQ9H6B1 395 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 PCOLCE2Q9UKZ9 415 aa11.09□□□□□ -0.63
SRP54-205ENST00000554803 UBR5O95071 2799 aaPredicted RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
SRP54-205ENST00000554803 TEP1Q99973 2627 aaKnown RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 MYO9AB2RTY4 2548 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 ZCWPW2A0A1B0GU75 182 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 STAMBPO95630 424 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 F11P03951 625 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 FYNP06241 537 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 C2P06681 752 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 ME2P23368 584 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 PTPN3P26045 913 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 PIK3R1P27986 724 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 ITPKBP27987 946 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 OPRD1P41143 372 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 ATP4BP51164 291 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 TPI1P60174 286 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 PITX1P78337 314 aaPredicted RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 RPL6Q02878 288 aaKnown RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 LSAMPQ13449 338 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 MTM1Q13496 603 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 ZNF77Q15935 545 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 EML3Q32P44 896 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 THEMIS2Q5TEJ8 643 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 PM20D1Q6GTS8 502 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 HACD2Q6Y1H2 254 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 MAVSQ7Z434 540 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 SCD5Q86SK9 330 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 KCNMB4Q86W47 210 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 NUP93Q8N1F7 819 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 DNAAF3Q8N9W5 541 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 FBXO27Q8NI29 283 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 MRPS31Q92665 395 aaKnown RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 FATE1Q969F0 183 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 FAM149B1Q96BN6 582 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 ZNF669Q96BR6 464 aaPredicted RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 VPS39Q96JC1 886 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 TUBGCP5Q96RT8 1024 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 LGMNQ99538 433 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 EFHD1Q9BUP0 239 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 ACE2Q9BYF1 805 aaPredicted RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 EML4Q9HC35 981 aaKnown RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 PNPOQ9NVS9 261 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 TOR4AQ9NXH8 423 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 NCKIPSDQ9NZQ3 722 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 GMIPQ9P107 970 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 SUCOQ9UBS9 1254 aaKnown RBP11.08□□□□□ -0.64
SRP54-205ENST00000554803 CIDEBQ9UHD4 219 aa11.08□□□□□ -0.64
SRP54-205ENST00000554803 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms