RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RPS10-NUDT3A0A1W2PQS6 291 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 A0A1W2PRG0 241 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 A6NCN8 305 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FAM90A8PA6NJQ4 464 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MYO1GB0I1T2 1018 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 KDM4EB2RXH2 506 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PTGES3LE9PB15 166 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 I6L893 689 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 LDB2O43679 373 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 GFPT2O94808 682 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MLYCDO95822 493 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 LDHCP07864 332 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MMP2P08253 660 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FAM90A13PP0C7W8 464 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FAM90A24PP0C7X0 464 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 RARGP13631 454 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 AGAP20933 346 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 GNLYP22749 145 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CHATP28329 748 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TNFRSF8P28908 595 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PPARGP37231 505 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 THPOP40225 353 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 GMPSP49915 693 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ENTPD1P49961 510 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PRAMEP78395 509 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CEBPZQ03701 1054 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PPATQ06203 517 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ST3GAL1Q11201 340 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CSTF3Q12996 717 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PRKG2Q13237 762 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SHBQ15464 509 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 COL28A1Q2UY09 1125 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF585BQ52M93 769 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SGO1Q5FBB7 561 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 OTUD1Q5VV17 481 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 DAB2IPQ5VWQ8 1189 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FAM205BPQ63HN1 556 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 RGMBQ6NW40 437 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF530Q6P9A1 599 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 KLHL35Q6PF15 583 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FBXO46Q6PJ61 603 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 LCTLQ6UWM7 567 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CCDC129Q6ZRS4 1044 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 Q6ZTK2 550 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MON1BQ7L1V2 547 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF367Q7RTV3 350 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NBPF5PQ86XG9 351 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SFTPA2Q8IWL1 248 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ARHGAP12Q8IWW6 846 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 GPC2Q8N158 579 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TTC39CQ8N584 583 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 GPT2Q8TD30 523 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SCFD2Q8WU76 684 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MMABQ96EY8 250 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 APOLD1Q96LR9 279 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CMTM3Q96MX0 182 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 WDFY2Q96P53 400 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SLITRK1Q96PX8 696 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZPBPQ9BS86 351 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FTOQ9C0B1 505 aaKnown RBP eCLIP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TKTL2Q9H0I9 626 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SYNCQ9H7C4 482 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MRPL44Q9H9J2 332 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 DBNDD1Q9H9R9 158 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 POLR1BQ9H9Y6 1135 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 HAUS2Q9NVX0 235 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ABI3Q9P2A4 366 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 IL36RNQ9UBH0 155 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PROCRQ9UNN8 238 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 GPR34Q9UPC5 381 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NFE2L3Q9Y4A8 694 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CEPT1Q9Y6K0 416 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SCN9AQ15858 1988 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FLT4P35916 1363 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 LOC400499M0QZD8 3231 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SPEF2Q9C093 1822 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZDBF2Q9HCK1 2354 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FAM237AA0A1B0GTK4 181 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FRMD3A2A2Y4 597 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 BECN2A8MW95 431 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 K7ENM7 598 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 VWA5AO00534 786 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 VILLO15195 856 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ITM2AO43736 263 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SLC28A2O43868 658 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NKX2-2O95096 273 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NDUFB4O95168 129 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 IPO7O95373 1038 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 IL7RP16871 459 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF182P17025 639 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NAGAP17050 411 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ALOX12P18054 663 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CD58P19256 250 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 GPTP24298 496 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TM4SF1P30408 202 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 HOXD13P35453 343 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 HADHAP40939 763 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PMS2P54278 862 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 F2RL1P55085 397 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ADORA2A-AS1P86434 159 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms