RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 BIRC2Q13490 618 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 LRP8Q14114 963 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 MESDQ14696 234 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 LACTB2Q53H82 288 aaPredicted RBP11.42□□□□□ -0.58
TUBB3-204ENST00000554116 RALGPS1Q5JS13 557 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 HENMT1Q5T8I9 393 aaKnown RBP11.42□□□□□ -0.58
TUBB3-204ENST00000554116 MARC1Q5VT66 337 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 USP45Q70EL2 814 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 CHST15Q7LFX5 561 aaPredicted RBP11.42□□□□□ -0.58
TUBB3-204ENST00000554116 GALNT13Q8IUC8 556 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 KCTD6Q8NC69 237 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 EXD1Q8NHP7 514 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 FAM71BQ8TC56 605 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 LRRN4Q8WUT4 740 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 ZPBPQ9BS86 351 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 AKIRIN1Q9H9L7 192 aaPredicted RBP11.42□□□□□ -0.58
TUBB3-204ENST00000554116 PRDM8Q9NQV8 689 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 RCOR3Q9P2K3 495 aaPredicted RBP11.42□□□□□ -0.58
TUBB3-204ENST00000554116 SLC23A2Q9UGH3 650 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 KLHL3Q9UH77 587 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 ZNHIT2Q9UHR6 403 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 CHKBQ9Y259 395 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 ANKRD17O75179 2603 aaKnown RBP11.42□□□□□ -0.58
TUBB3-204ENST00000554116 SPTBP11277 2137 aa11.42□□□□□ -0.58
TUBB3-204ENST00000554116 POLR1CO15160 346 aaPredicted RBP11.41□□□□□ -0.58
TUBB3-204ENST00000554116 KRT7P08729 469 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 ANKRD34CP0C6C1 535 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 F3P13726 295 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 ARSEP51690 589 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 TAS2R40P59535 323 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 DSC2Q02487 901 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 KLRB1Q12918 225 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 PEX6Q13608 980 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 DPYSL3Q14195 570 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 MAP7Q14244 749 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 PDK2Q15119 407 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 ZFYVE27Q5T4F4 411 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 ZNF648Q5T619 568 aaPredicted RBP11.41□□□□□ -0.58
TUBB3-204ENST00000554116 C16orf46Q6P387 395 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 RHOT2Q8IXI1 618 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 NSMCE1Q8WV22 266 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 MAML1Q92585 1016 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 AHCYL2Q96HN2 611 aaKnown RBP11.41□□□□□ -0.58
TUBB3-204ENST00000554116 PLEKHG4BQ96PX9 1271 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 LYSMD1Q96S90 227 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 RBSNQ9H1K0 784 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 ARFGAP3Q9NP61 516 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 VPS18Q9P253 973 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 ZNF624Q9P2J8 865 aaPredicted RBP11.41□□□□□ -0.58
TUBB3-204ENST00000554116 CPNE7Q9UBL6 633 aa11.41□□□□□ -0.58
TUBB3-204ENST00000554116 GOLGA6L3A6NEY3 463 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 KIF1CO43896 1103 aaKnown RBP11.4□□□□□ -0.58
TUBB3-204ENST00000554116 MFSD11O43934 449 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 NUAK1O60285 661 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 TIAF1O95411 115 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ASMTLO95671 621 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 MMP2P08253 660 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ACP5P13686 325 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ZNF30P17039 623 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ZNF8P17098 575 aaPredicted RBP11.4□□□□□ -0.58
TUBB3-204ENST00000554116 MAN1A1P33908 653 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 SLC19A1P41440 591 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ARHGAP25P42331 645 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 LEPRP48357 1165 aaKnown RBP11.4□□□□□ -0.58
TUBB3-204ENST00000554116 SPINT3P49223 89 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 EPHA4P54764 986 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 LAMB3Q13751 1172 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 SEPT6Q14141 434 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ANKRD20A8PQ5CZ79 823 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 TCTN3Q6NUS6 607 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 LYSMD3Q7Z3D4 306 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 BBS5Q8N3I7 341 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 GALNT6Q8NCL4 622 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 KIAA1143Q96AT1 154 aaPredicted RBP11.4□□□□□ -0.58
TUBB3-204ENST00000554116 C9orf72Q96LT7 481 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 RUFY1Q96T51 708 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ZNF670Q9BS34 389 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 EFHD1Q9BUP0 239 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 TDRD1Q9BXT4 1180 aaKnown RBP11.4□□□□□ -0.58
TUBB3-204ENST00000554116 TRIM55Q9BYV6 548 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 TRIT1Q9H3H1 467 aaKnown RBP11.4□□□□□ -0.58
TUBB3-204ENST00000554116 ATXN10Q9UBB4 475 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 CROTQ9UKG9 612 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 TLK1Q9UKI8 766 aa11.4□□□□□ -0.58
TUBB3-204ENST00000554116 SEC16AO15027 2179 aa11.4□□□□□ -0.59
TUBB3-204ENST00000554116 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 CELSR1Q9NYQ6 3014 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 LILRA5A6NI73 299 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 SNX2O60749 519 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 DNAJB5O75953 348 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 AGFG2O95081 481 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 BRAFP15056 766 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 TYRP1P17643 537 aa11.39□□□□□ -0.59
TUBB3-204ENST00000554116 XRCC1P18887 633 aaPredicted RBP11.39□□□□□ -0.59
TUBB3-204ENST00000554116 KDELR1P24390 212 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms