RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 SPRED1Q7Z699 444 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 SLC9B2Q86UD5 537 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 PROSER1Q86XN7 944 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 REXO1L1PQ8IX06 675 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 RASGEF1CQ8N431 466 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 SFRP1Q8N474 314 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 ARL14Q8N4G2 192 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 OR4K2Q8NGD2 314 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 GDAP1Q8TB36 358 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 ZNF398Q8TD17 642 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 STYXQ8WUJ0 223 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 TMEM159Q96B96 161 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 LIN37Q96GY3 246 aaPredicted RBP8.18□□□□□ -1.1
PCNX1-204ENST00000553428 APOL2Q9BQE5 337 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 ETNK1Q9HBU6 452 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 SARS2Q9NP81 518 aaKnown RBP8.18□□□□□ -1.1
PCNX1-204ENST00000553428 WASH6PQ9NQA3 447 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 TMPRSS11EQ9UL52 423 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 RIMKLBQ9ULI2 386 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 ST14Q9Y5Y6 855 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 RNF215Q9Y6U7 377 aa8.18□□□□□ -1.1
PCNX1-204ENST00000553428 A0A1W2PQM1 296 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 HEATR9A2RTY3 570 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 A6NCN8 305 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 PRR19A6NJB7 356 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 AGAP14A8MT82 685 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 CES2O00748 559 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 LDB2O43679 373 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 BUD23O43709 281 aaKnown RBP8.17□□□□□ -1.1
PCNX1-204ENST00000553428 KIF5CO60282 957 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 USP12O75317 370 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 SRP72O76094 671 aaKnown RBP8.17□□□□□ -1.1
PCNX1-204ENST00000553428 RALBP11234 206 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 F3P13726 295 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 MSH3P20585 1137 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 ITGALP20701 1170 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 PSMA3P25788 255 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 CCKBRP32239 447 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 LSSP48449 732 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 MAZP56270 477 aaKnown RBP8.17□□□□□ -1.1
PCNX1-204ENST00000553428 CLDN6P56747 220 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 CCL7P80098 99 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 GPLD1P80108 840 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 XIAPP98170 497 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 CDK16Q00536 496 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 B4GALNT1Q00973 533 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 DMPKQ09013 629 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 NFATC2Q13469 925 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 SNX1Q13596 522 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 SPARCL1Q14515 664 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 INSCQ1MX18 579 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 GPRC6AQ5T6X5 926 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 ARMC3Q5W041 872 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 IYDQ6PHW0 289 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 NLRP9Q7RTR0 991 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 SNX20Q7Z614 316 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 TRAPPC5Q8IUR0 188 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 WDR36Q8NI36 951 aaKnown RBP8.17□□□□□ -1.1
PCNX1-204ENST00000553428 PEX13Q92968 403 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-204ENST00000553428 STRADBQ9C0K7 418 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 KCNF1Q9H3M0 494 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 EPB41L1Q9H4G0 881 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 POLR1BQ9H9Y6 1135 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 UCK1Q9HA47 277 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 EIF2B3Q9NR50 452 aaKnown RBP8.17□□□□□ -1.1
PCNX1-204ENST00000553428 KLC4Q9NSK0 619 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 NLE1Q9NVX2 485 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-204ENST00000553428 TBC1D29Q9UFV1 150 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 FKBPLQ9UIM3 349 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 RABGEF1Q9UJ41 708 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 KCNK6Q9Y257 313 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 PLEKHM1Q9Y4G2 1056 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 PCDHGA8Q9Y5G5 932 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 ENTPD2Q9Y5L3 495 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 AK5Q9Y6K8 562 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 SLC30A1Q9Y6M5 507 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 LRP4O75096 1905 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 KNTC1P50748 2209 aa8.17□□□□□ -1.1
PCNX1-204ENST00000553428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.16□□□□□ -1.1
PCNX1-204ENST00000553428 CCDC187A0A096LP49 1063 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 MROH6A6NGR9 719 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 CFAP99D6REC4 459 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 PPM1DO15297 605 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 TDRD6O60522 2096 aaKnown RBP8.16□□□□□ -1.1
PCNX1-204ENST00000553428 UGT1A9O60656 530 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 MTX2O75431 263 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 CPNE6O95741 557 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 XRCC1P18887 633 aaPredicted RBP8.16□□□□□ -1.1
PCNX1-204ENST00000553428 UGT1A6P19224 532 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 IDSP22304 550 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 UGT1A1P22309 533 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 UGT1A4P22310 534 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 CXCR5P32302 372 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 UGT1A3P35503 534 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 UGT1A5P35504 534 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 LMAN1P49257 510 aa8.16□□□□□ -1.1
PCNX1-204ENST00000553428 EPHA4P54764 986 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms