RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 DAB2P98082 770 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 KCNJ11Q14654 390 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 ELOCQ15369 112 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 SMAD1Q15797 465 aaKnown RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 INAVAQ3KP66 663 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 FAM83HQ6ZRV2 1179 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 CHST15Q7LFX5 561 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 TMPRSS9Q7Z410 1059 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 C17orf82Q86X59 251 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 NAGSQ8N159 534 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 MPP5Q8N3R9 675 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 FSTL5Q8N475 847 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 BEND7Q8N7W2 519 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 CCDC89Q8N998 374 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 OR13J1Q8NGT2 312 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 CPT1BQ92523 772 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 C16orf45Q96MC5 204 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 VPS35Q96QK1 796 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 FERMT1Q9BQL6 677 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 ZSCAN5AQ9BUG6 496 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 TRIM39Q9HCM9 518 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 TRNAU1APQ9NX07 287 aaKnown RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 SCHIP1Q9P0W5 487 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 VPS18Q9P253 973 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 PAK5Q9P286 719 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 TBC1D29Q9UFV1 150 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 APOBEC2Q9Y235 224 aaKnown RBP11.08□□□□□ -0.64
RAB5B-208ENST00000550283 RNF215Q9Y6U7 377 aa11.08□□□□□ -0.64
RAB5B-208ENST00000550283 GOLGA4Q13439 2230 aaKnown RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 UQCRHLA0A096LP55 91 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 CCDC162PA2VCL2 907 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 EME2A4GXA9 379 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 AGAP14A8MT82 685 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 GRID2O43424 1007 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 OPA1O60313 960 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 PHF2O75151 1096 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 SRP72O76094 671 aaKnown RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ECEL1O95672 775 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 UQCRHP07919 91 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 F7P08709 466 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 C1QTNF9P0C862 333 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 PSMA3P25788 255 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ACTR1BP42025 376 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 PDX1P52945 283 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 SESN2P58004 480 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ACTR1AP61163 376 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 BASP1P80723 227 aaKnown RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 SHC2P98077 582 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 GPS1Q13098 491 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 CAMK2BQ13554 666 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 HLTFQ14527 1009 aaKnown RBP eCLIP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 SEMA3AQ14563 771 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 NR0B2Q15466 257 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 HES3Q5TGS1 186 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 CCDC137Q6PK04 289 aaKnown RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 CES3Q6UWW8 571 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 DET1Q7L5Y6 550 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 GSTA5Q7RTV2 222 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 TMPRSS7Q7RTY8 843 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 CAND1Q86VP6 1230 aaKnown RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF761Q86XN6 746 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 GKN2Q86XP6 184 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 GALNT13Q8IUC8 556 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 LILRA3Q8N6C8 439 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ARL10Q8N8L6 244 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 DDHD1Q8NEL9 900 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF398Q8TD17 642 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 MAIP1Q8WWC4 291 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 GATA6Q92908 595 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 CCDC74AQ96AQ1 378 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 DPEP2Q9H4A9 486 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 PRDM8Q9NQV8 689 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 NLE1Q9NVX2 485 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 PADI4Q9UM07 663 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 PKP3Q9Y446 797 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 FASNP49327 2511 aaKnown RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 RP1P56715 2156 aa11.07□□□□□ -0.64
RAB5B-208ENST00000550283 SETXQ7Z333 2677 aaKnown RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ARHGEF17Q96PE2 2063 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-208ENST00000550283 ANKRD11Q6UB99 2663 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 A0A1W2PQM1 296 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 FAM221BA6H8Z2 402 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 C2orf81A6NN90 581 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 KIF2AO00139 706 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CES2O00748 559 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 PPM1DO15297 605 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CAPNS1P04632 268 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 ALPPL2P10696 532 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 BRAFP15056 766 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 IVDP26440 423 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 MGAT1P26572 445 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 MC4RP32245 332 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 MAGEA6P43360 314 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CCL7P80098 99 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 TMEM115Q12893 351 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-208ENST00000550283 NFATC2Q13469 925 aa11.06□□□□□ -0.64
RAB5B-208ENST00000550283 CDCP2Q5VXM1 449 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms