RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 KIR2DS5Q14953 304 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 QPCTQ16769 361 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 ATP13A4Q4VNC1 1196 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 ALS2CLQ60I27 953 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 CRTC3Q6UUV7 619 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 FAM26EQ8N5C1 309 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 ESX1Q8N693 406 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 NIPA2Q8N8Q9 360 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 SH3KBP1Q96B97 665 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 TRIM11Q96F44 468 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 C9orf72Q96LT7 481 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 TGM7Q96PF1 710 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 PSMG3-AS1Q96PY0 264 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 LYSMD1Q96S90 227 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 EFHD1Q9BUP0 239 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 OR2AG1Q9H205 316 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 OSGEPL1Q9H4B0 414 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 FAM83DQ9H4H8 585 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 KLC4Q9NSK0 619 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 SLC23A2Q9UGH3 650 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 ANAPC7Q9UJX3 599 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 BLACEA4D250 179 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 MATN3O15232 486 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 KIF1CO43896 1103 aaKnown RBP16.24■□□□□ 0.19
SSH1-208ENST00000548522 NUAK1O60285 661 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 C9P02748 559 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 PDGFAP04085 211 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 MMP2P08253 660 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 MC1RQ01726 317 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 GBE1Q04446 702 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 ERV3-1Q14264 604 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 GALNT3Q14435 633 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 PIGHQ14442 188 aaPredicted RBP16.24■□□□□ 0.19
SSH1-208ENST00000548522 PAFAH1B3Q15102 231 aaKnown RBP16.24■□□□□ 0.19
SSH1-208ENST00000548522 SEPT7Q16181 437 aaKnown RBP16.24■□□□□ 0.19
SSH1-208ENST00000548522 PHYKPLQ8IUZ5 450 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 FAM71BQ8TC56 605 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 RSC1A1Q92681 617 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 OR6C1Q96RD1 312 aa16.24■□□□□ 0.19
SSH1-208ENST00000548522 TRIT1Q9H3H1 467 aaKnown RBP16.24■□□□□ 0.19
SSH1-208ENST00000548522 ZNF624Q9P2J8 865 aaPredicted RBP16.24■□□□□ 0.19
SSH1-208ENST00000548522 SPTBN1Q01082 2364 aaKnown RBP16.24■□□□□ 0.19
SSH1-208ENST00000548522 KIAA0754O94854 1291 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 SLC4A1P02730 911 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 KRT7P08729 469 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 PIRTP0C851 137 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 CD86P42081 329 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 SSR1P43307 286 aaKnown RBP16.23■□□□□ 0.19
SSH1-208ENST00000548522 UQCRFS1P47985 274 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 KLRB1Q12918 225 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 SEPT6Q14141 434 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 MAP7Q14244 749 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 CRTC2Q53ET0 693 aaPredicted RBP16.23■□□□□ 0.19
SSH1-208ENST00000548522 HGSNATQ68CP4 663 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 PLXDC1Q8IUK5 500 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 NAP1L5Q96NT1 182 aaPredicted RBP16.23■□□□□ 0.19
SSH1-208ENST00000548522 NUP85Q9BW27 656 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.23■□□□□ 0.19
SSH1-208ENST00000548522 CARD9Q9H257 536 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 RMI1Q9H9A7 625 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 RCOR3Q9P2K3 495 aaPredicted RBP16.23■□□□□ 0.19
SSH1-208ENST00000548522 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 DNAJC16Q9Y2G8 782 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 KCTD3Q9Y597 815 aa16.23■□□□□ 0.19
SSH1-208ENST00000548522 MTX2O75431 263 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 KATNA1O75449 491 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 DNAJB5O75953 348 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 UBXN7O94888 489 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 TIAF1O95411 115 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 SLC2A4P14672 509 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 SLC19A1P41440 591 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 CD97P48960 835 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 RPL26P61254 145 aaKnown RBP16.22■□□□□ 0.19
SSH1-208ENST00000548522 PPP1CAP62136 330 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 FANCCQ00597 558 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 SLC10A2Q12908 348 aaPredicted RBP16.22■□□□□ 0.19
SSH1-208ENST00000548522 KHDC1Q4VXA5 237 aaKnown RBP16.22■□□□□ 0.19
SSH1-208ENST00000548522 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
SSH1-208ENST00000548522 ANKRD20A8PQ5CZ79 823 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 ZNF569Q5MCW4 686 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 CCDC122Q5T0U0 273 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 C6orf15Q6UXA7 325 aaPredicted RBP16.22■□□□□ 0.19
SSH1-208ENST00000548522 TMEM26Q6ZUK4 368 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 LRRC49Q8IUZ0 686 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 PQLC3Q8N755 202 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 GPR26Q8NDV2 337 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 RUFY1Q96T51 708 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 EPB41L1Q9H4G0 881 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 KCND1Q9NSA2 647 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 PKD2L2Q9NZM6 624 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 IP6K2Q9UHH9 426 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 LNPEPQ9UIQ6 1025 aa16.22■□□□□ 0.19
SSH1-208ENST00000548522 RPL26L1Q9UNX3 145 aaKnown RBP16.22■□□□□ 0.19
SSH1-208ENST00000548522 CDC14CA4D256 554 aa16.21■□□□□ 0.19
SSH1-208ENST00000548522 OR52A4PA6NMU1 304 aa16.21■□□□□ 0.19
SSH1-208ENST00000548522 ANKRD66B4E2M5 251 aa16.21■□□□□ 0.19
SSH1-208ENST00000548522 KCNK1O00180 336 aa16.21■□□□□ 0.19
SSH1-208ENST00000548522 RASSF9O75901 435 aa16.21■□□□□ 0.19
SSH1-208ENST00000548522 NDUFA10O95299 355 aa16.21■□□□□ 0.19
SSH1-208ENST00000548522 NTRK1P04629 796 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms