RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TMEM65Q6PI78 240 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 LINC00696Q6ZRV3 163 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 COLCA1Q6ZS62 124 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 CENPVQ7Z7K6 275 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 WDR5BQ86VZ2 330 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 NLRP14Q86W24 1093 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 LURAP1LQ8IV03 231 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 MCEMP1Q8IX19 187 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 PEX5LQ8IYB4 626 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 C16orf71Q8IYS4 520 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 SCYL3Q8IZE3 742 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 EXD3Q8N9H8 876 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 HJURPQ8NCD3 748 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 FAR1Q8WVX9 515 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 MSI2Q96DH6 328 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 HARBI1Q96MB7 349 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM237Q96Q45 408 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 NUDCD1Q96RS6 583 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 TSPAN18Q96SJ8 248 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 SEPT5Q99719 369 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 RTN4RQ9BZR6 473 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 MMP27Q9H306 513 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 TSPY26PQ9H489 355 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 PLEKHA4Q9H4M7 779 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 SLC28A3Q9HAS3 691 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 PIH1D3Q9NQM4 214 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 PAPOLBQ9NRJ5 636 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM184CQ9NVA4 438 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 GDE1Q9NZC3 331 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 HEY2Q9UBP5 337 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 BCORL1Q5H9F3 1711 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 LTBP4Q8N2S1 1624 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 EMSYQ7Z589 1322 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 POLA1P09884 1462 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 IQSEC2Q5JU85 1478 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 HTR3EA5X5Y0 456 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ANXA2P2A6NMY6 339 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ENO4A6NNW6 628 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 PRSS44E7EML9 344 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CCDC188H7C350 402 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 DNM1LO00429 736 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 MSI1O43347 362 aaKnown RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SLC25A17O43808 307 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 HIST1H2ABP04908 130 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CD63P08962 238 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 PCP11498 1178 aaKnown RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 AKR1A1P14550 325 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 PDGFRAP16234 1089 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 HIST1H2ADP20671 130 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ITGAXP20702 1163 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CHRNA5P30532 468 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF84P51523 738 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CLDN2P57739 230 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 POLR2FP61218 127 aaKnown RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 YPEL5P62699 121 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 TUBB4BP68371 445 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ECT2LQ008S8 904 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ZBTB16Q05516 673 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CXCL9Q07325 125 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 C17orf67Q0P5P2 114 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 TEFQ10587 303 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CAPSQ13938 189 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 KRT33BQ14525 404 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF273Q14593 569 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 KRTAP27-1Q3LI81 207 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 EARS2Q5JPH6 523 aaKnown RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 C6orf141Q5SZD1 244 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SFMBT2Q5VUG0 894 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 DHRS7BQ6IAN0 325 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 LRRC8EQ6NSJ5 796 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 VSTM1Q6UX27 236 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 HIST3H2AQ7L7L0 130 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 TAOK1Q7L7X3 1001 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SPATA21Q7Z572 469 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SPATA19Q7Z5L4 167 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ARFGAP1Q8N6T3 406 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF548Q8NEK5 533 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CORO2AQ92828 525 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CTAGE1Q96RT6 745 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF347Q96SE7 839 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CDRT15Q96T59 188 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 EGFL8Q99944 293 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SYT17Q9BSW7 474 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SPXQ9BT56 116 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 UTP14AQ9BVJ6 771 aaKnown RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SLC5A7Q9GZV3 580 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 TXNRD2Q9NNW7 524 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 INTS10Q9NVR2 710 aaKnown RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 HAO2Q9NYQ3 351 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 CRNNQ9UBG3 495 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-210ENST00000547654 IL17BQ9UHF5 180 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 LIPGQ9Y5X9 500 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 HS3ST3B1Q9Y662 390 aa4.27□□□□□ -1.73
SCAF11-210ENST00000547654 SPATA31A5Q5VU36 1347 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 SPATA31A7Q8IWB4 1347 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RIMS1Q86UR5 1692 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 A0A0G2JK05 382 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms