RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MAP3K13O43283 966 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CES1P23141 567 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 PBLDP30039 288 aaPredicted RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 DGKGP49619 791 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 SEC13P55735 322 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 PLIN5Q00G26 463 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CUL3Q13618 768 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 BOP1Q14137 746 aaKnown RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 FRG1Q14331 258 aaKnown RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 KPNB1Q14974 876 aaKnown RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CARD16Q5EG05 197 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 ACSBG2Q5FVE4 666 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 EPGNQ6UW88 154 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 HSD11B1LQ7Z5J1 315 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 FAM217AQ8IXS0 508 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 OR52B6Q8NGF0 335 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 ZNF398Q8TD17 642 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 DLG3Q92796 817 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 PYCR2Q96C36 320 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 MTFMTQ96DP5 389 aaKnown RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CHFRQ96EP1 664 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 LMLNQ96KR4 655 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 NRTNQ99748 197 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 SPATA16Q9BXB7 569 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CAAP1Q9H8G2 361 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CD274Q9NZQ7 290 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 EIF2B4Q9UI10 523 aaKnown RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 ERVW-1Q9UQF0 538 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 TBC1D3BA6NDS4 549 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 HEPACAM2A8MVW5 462 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 K7ESM1 405 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 GSC2O15499 205 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 SH3BGRLO75368 114 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 ADH5P11766 374 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 RECQLP46063 649 aaPredicted RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 BTKQ06187 659 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 ACAP2Q15057 778 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 UNC50Q53HI1 259 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CPXM2Q8N436 756 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 SLC39A3Q9BRY0 314 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 NSUN3Q9H649 340 aaKnown RBP11.85□□□□□ -0.51
CCDC38-202ENST00000546386 IL1RL2Q9HB29 575 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 ZBTB26Q9HCK0 441 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 CCDC167Q9P0B6 97 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 GBF1Q92538 1859 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 ATXN2Q99700 1313 aaKnown RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 HDAC3O15379 428 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 ZNF189O75820 626 aaPredicted RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 TSPAN12O95859 305 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 IL1BP01584 269 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 AKT1P31749 480 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 CDKN3Q16667 212 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PHKG1Q16816 387 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 TYSND1Q2T9J0 566 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 SGO1Q5FBB7 561 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 VRK3Q8IV63 474 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 STK40Q8N2I9 435 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 FGF14Q92915 247 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 TSPAN17Q96FV3 270 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 NPAS2Q99743 824 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 BTBD10Q9BSF8 475 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 CLPBQ9H078 707 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 SLC6A17Q9H1V8 727 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 GSTO2Q9H4Y5 243 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 RAP2CQ9Y3L5 183 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 MTCL1Q9Y4B5 1905 aaKnown RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PENKP01210 267 aaPredicted RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 SERPINA6P08185 405 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PTPN4P29074 926 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PGM1P36871 562 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PRKAA2P54646 552 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PKNOX1P55347 436 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 AP1S1P61966 158 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 ZNF678Q5SXM1 525 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 ACBD5Q5T8D3 534 aaPredicted RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 GK5Q6ZS86 529 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 SNX32Q86XE0 403 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 SREK1Q8WXA9 508 aaKnown RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 KLK6Q92876 244 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PLEKHG4BQ96PX9 1271 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 LRMDAQ9H2I8 198 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 MAGEE1Q9HCI5 957 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PRM3Q9NNZ6 103 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 PCDH12Q9NPG4 1184 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 TMPRSS11EQ9UL52 423 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 NUP214P35658 2090 aaPredicted RBP11.84□□□□□ -0.51
CCDC38-202ENST00000546386 MYO10Q9HD67 2058 aa11.84□□□□□ -0.51
CCDC38-202ENST00000546386 FFAR3O14843 346 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 GPR42O15529 346 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
CCDC38-202ENST00000546386 PEX11AO75192 247 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 GGT5P36269 586 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 TTPAP49638 278 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 B4GALNT1Q00973 533 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 RAD51Q06609 339 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 CCDC15Q0P6D6 951 aa11.83□□□□□ -0.52
CCDC38-202ENST00000546386 ASPHQ12797 758 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms