RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TBC1D3EA0A087X179 549 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3KA0A087X1G2 549 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 CTAGE15A4D2H0 777 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3FA6NER0 549 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ANKRD66B4E2M5 251 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3LB9A6J9 549 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 PSMD11O00231 422 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 RAD51CO43502 376 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SUN1O94901 812 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 HEXIM1O94992 359 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 FSBPO95073 299 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3HP0C7X1 549 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 CTAGE8P0CG41 777 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ZNF30P17039 623 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ITIH2P19823 946 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 FUT4P22083 530 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 MAT2AP31153 395 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 HNF1BP35680 557 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 NUDT1P36639 197 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 PTGER3P43115 390 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 MAGEA6P43360 314 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 DHPSP49366 369 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 CCR5P51681 352 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 STC1P52823 247 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 RPS21P63220 83 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 BNIP3Q12983 259 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ARHGEF7Q14155 803 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SPARCL1Q14515 664 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 PTPRRQ15256 657 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 LPAL2Q16609 132 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ZNF284Q2VY69 593 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TMEM52BQ4KMG9 183 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SETMARQ53H47 684 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SPDYCQ5MJ68 293 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 DNTTIP2Q5QJE6 756 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ANKRD22Q5VYY1 191 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3GQ6DHY5 549 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3CQ6IPX1 549 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 NEK5Q6P3R8 708 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 RANBP10Q6VN20 620 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 PPP1R21Q6ZMI0 780 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ZNF534Q76KX8 674 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 GLT6D1Q7Z4J2 308 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 MAATS1Q7Z4T9 603 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 LINC00523Q86TU6 105 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 CTAGE6Q86UF2 777 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SLC41A1Q8IVJ1 513 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 CTAGE4Q8IX94 777 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SPACA3Q8IXA5 215 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TMEFF1Q8IYR6 380 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3Q8IZP1 549 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 DEFB119Q8N690 84 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 CEP112Q8N8E3 955 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 DENND6BQ8NEG7 585 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 BLOC1S5Q8TDH9 187 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 CPT1BQ92523 772 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ATOH1Q92858 354 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 BIRC7Q96CA5 298 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SCRN2Q96FV2 425 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ZC3H10Q96K80 434 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 C1QTNF7Q9BXJ2 289 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 DUSP15Q9H1R2 295 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 L2HGDHQ9H9P8 463 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 FAM86C1Q9NVL1 165 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 HACD3Q9P035 362 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ADAM30Q9UKF2 790 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 RAB23Q9ULC3 237 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ZFR2Q9UPR6 939 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SHOC2Q9UQ13 582 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 PPIL1Q9Y3C6 166 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 SPO11Q9Y5K1 396 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TDRD6O60522 2096 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 A0A0U1RQS6 177 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 TCRBV7S3A2A0A539 114 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 FAM221AA4D161 298 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 IGLON5A6NGN9 336 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 EFCAB8A8MWE9 144 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 A8MX80 341 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 DNALI1O14645 258 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 PSMD3O43242 534 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 TM7SF2O76062 418 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 RECQL5O94762 991 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 RHOBTB1O94844 696 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 SEC31AO94979 1220 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 EPN2O95208 641 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 AGTP01019 485 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 C1SP09871 688 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CD8BP10966 210 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 HNRNPA2B1P22626 353 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CD27P26842 260 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 HOXD12P35452 270 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 ADCY8P40145 1251 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 NBL1P41271 181 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CLCN7P51798 805 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 TERF1P54274 439 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 MRPS25P82663 173 aaKnown RBP6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CDK16Q00536 496 aa6.31□□□□□ -1.4
PRKDC-211ENST00000546304 CDH17Q12864 832 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms