RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TANC1Q9C0D5 1861 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 TCRBV5S2A0A599 114 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 CCDC154A6NI56 674 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 IQCF5A8MTL0 148 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 SLC22A3O75751 556 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 OR4F21O95013 312 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 ASGR1P07306 291 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 OR4D2P58180 307 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 RAD51Q06609 339 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 PMS2P3Q13401 168 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 RCAN2Q14206 197 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 PARP15Q460N3 678 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 VARS2Q5ST30 1063 aaKnown RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 OTUD3Q5T2D3 398 aaPredicted RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 NANOGP8Q6NSW7 305 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 GLT6D1Q7Z4J2 308 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 ZNF598Q86UK7 904 aaKnown RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 OR52B6Q8NGF0 335 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 UROC1Q96N76 676 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 TRIB3Q96RU7 358 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 NANOGQ9H9S0 305 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 SYTL2Q9HCH5 934 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 PCDHGC4Q9Y5F7 938 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 NDST3O95803 873 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 RPS17P08708 135 aaKnown RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 OGNP20774 298 aaKnown RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 ENTPD1P49961 510 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 MAPK10P53779 464 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 MYBPC3Q14896 1274 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 ZIK1Q3SY52 487 aaPredicted RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 CLLU1OSQ5K130 101 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 SPRED1Q7Z699 444 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 ALDH16A1Q8IZ83 802 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 GIPC2Q8TF65 315 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 BIRC7Q96CA5 298 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 C8orf48Q96LL4 319 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 BIRC8Q96P09 236 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 SEPT5Q99719 369 aaPredicted RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 NAA50Q9GZZ1 169 aaKnown RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 ZFYVE28Q9HCC9 887 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 PCTPQ9UKL6 214 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 PCDHB5Q9Y5E4 795 aa15.67■□□□□ 0.1
LDLR-204ENST00000545707 MAGED1Q9Y5V3 778 aaPredicted RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 ZFC3H1O60293 1989 aaKnown RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 LCHNA4D1U4 455 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 B4GAT1O43505 415 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 OAZ2O95190 189 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 ATE1O95260 518 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 RASAL1O95294 804 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 TACR2P21452 398 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 HRH2P25021 359 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 RFC2P35250 354 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 POLR2JP52435 117 aaKnown RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 ZNF140P52738 457 aaPredicted RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 ESRRGP62508 458 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 KCTD21Q4G0X4 260 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 CTXN3Q4LDR2 81 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 IRAK1BP1Q5VVH5 260 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 ZBTB46Q86UZ6 589 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 PACRGLQ8N7B6 248 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 FNDC5Q8NAU1 212 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 PPM1MQ96MI6 270 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 RNF145Q96MT1 663 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 NPLQ9BXD5 320 aaPredicted RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 PDFQ9HBH1 243 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 NLE1Q9NVX2 485 aaPredicted RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 HACD3Q9P035 362 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 SYNCRIPO60506 623 aaKnown RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 SNX2O60749 519 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 PRR35P0CG20 571 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 PCNAP12004 261 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 HOXD9P28356 352 aaPredicted RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 SLC6A4P31645 630 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 RPS24P62847 133 aaKnown RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 TNK2Q07912 1038 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 SELPLGQ14242 412 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 ZBED5Q49AG3 693 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 CYBRD1Q53TN4 286 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 GPR107Q5VW38 600 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 TMEM214Q6NUQ4 689 aaKnown RBP15.66■□□□□ 0.1
LDLR-204ENST00000545707 KLHL35Q6PF15 583 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 EFHBQ8N7U6 833 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 TRIM54Q9BYV2 358 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 CXorf21Q9HAI6 301 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 POPDC3Q9HBV1 291 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 FKBPLQ9UIM3 349 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 ANAPC2Q9UJX6 822 aa15.66■□□□□ 0.1
LDLR-204ENST00000545707 ESRRBO95718 433 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 TSPAN12O95859 305 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 IGHA2P01877 340 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 GPIP06744 558 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 HTR6P50406 440 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 KCNA10Q16322 511 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 NFE2Q16621 373 aaPredicted RBP15.65■□□□□ 0.1
LDLR-204ENST00000545707 C6orf136Q5SQH8 315 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 TMTC4Q5T4D3 741 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 GLB1LQ6UWU2 654 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 C17orf99Q6UX52 265 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms