RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CPT2P23786 658 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 GPR143P51810 404 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 KRTAP1-1Q07627 177 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 GRSF1Q12849 480 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 NEDD9Q14511 834 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 HNF4GQ14541 408 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 EFNB3Q15768 340 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SIGIRRQ6IA17 410 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SHC4Q6S5L8 630 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 Q6ZTK2 550 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 MON1BQ7L1V2 547 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SHFQ7M4L6 423 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PIP4P1Q86T03 277 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 MMP21Q8N119 569 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 NKAIN3Q8N8D7 197 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ZNF548Q8NEK5 533 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PTPMT1Q8WUK0 201 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 NSMCE1Q8WV22 266 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 RND1Q92730 232 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SECISBP2LQ93073 1101 aaKnown RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 COQ8BQ96D53 544 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 CCDC34Q96HJ3 373 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ZFYVE19Q96K21 471 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 CDRT15Q96T59 188 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 DNAJC18Q9H819 358 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 FZD3Q9NPG1 666 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 MARCH4Q9P2E8 410 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 OR14J1Q9UGF5 321 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 EXO1Q9UQ84 846 aaKnown RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 C1orf167Q5SNV9 1468 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 PXDNQ92626 1479 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 PNPLA6Q8IY17 1366 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 LNP1A1A4G5 178 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 A6NL46 340 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 H0YGN5 161 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 PLPP2O43688 288 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 DIAPH2O60879 1101 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 ZC3H11AO75152 810 aaKnown RBP eCLIP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 GGPS1O95749 300 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 BCL10O95999 233 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 AFPP02771 609 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 HIST1H2ABP04908 130 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 FGF2P09038 288 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 ACTN1P12814 892 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 HIST1H2ADP20671 130 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 TBXAS1P24557 533 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 MSH2P43246 934 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 MMP14P50281 582 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 PPP2R2BQ00005 443 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 SPOCK1Q08629 439 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 BAATQ14032 418 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 CTTNQ14247 550 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 GPR18Q14330 331 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 RBMS2Q15434 407 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 TRIP6Q15654 476 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 ZNF805Q5CZA5 627 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 ZNF628Q5EBL2 1059 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 C9orf152Q5JTZ5 239 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 ZNF626Q68DY1 528 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 METTL2BQ6P1Q9 378 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 HIST3H2AQ7L7L0 130 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 PATL1Q86TB9 770 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 C7orf57Q8NEG2 295 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 TMEM163Q8TC26 289 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 TRIB2Q92519 343 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 GRAMD2BQ96HH9 432 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 METTL2AQ96IZ6 378 aaKnown RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 CCDC106Q9BWC9 280 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 C1QTNF1Q9BXJ1 281 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 EPB41L5Q9HCM4 733 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 MMP25Q9NPA2 562 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 TUBA8Q9NY65 449 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 ANAPC2Q9UJX6 822 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 FBXW11Q9UKB1 542 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 CDC14AQ9UNH5 594 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 TRPM3Q9HCF6 1732 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-207ENST00000544052 PLCH1Q4KWH8 1693 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 RGS12O14924 1447 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 PLEKHH1Q9ULM0 1364 aa3.73□□□□□ -1.81
SCFD1-207ENST00000544052 ARHGEF28Q8N1W1 1705 aaKnown RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 GAGE12JA6NER3 117 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 B4DGG1 531 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 M0QZ24 198 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ITM2AO43736 263 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TADA2AO75478 443 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 RSL1D1O76021 490 aaKnown RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 PRF1P14222 555 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 MAOAP21397 527 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ALDH7A1P49419 539 aaKnown RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 RAD23AP54725 363 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ADORA2A-AS1P86434 159 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 CXCL9Q07325 125 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 SRSF4Q08170 494 aaKnown RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 SNTB1Q13884 538 aaKnown RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 MANEAQ5SRI9 462 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 KRT79Q5XKE5 535 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 GGNBP1Q5YKI7 109 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 GALNT13Q8IUC8 556 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 FOXRED2Q8IWF2 684 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms