RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SCN1BQ07699 218 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 SMARCB1Q12824 385 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 SPATA31D4Q6ZUB0 917 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 ANKRD46Q86W74 232 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 ANKRD52Q8NB46 1076 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 SLC43A3Q8NBI5 491 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 FAM156AQ8NDB6 213 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 JOSD2Q8TAC2 188 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 COPS8Q99627 209 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 TMEM134Q9H6X4 195 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 GRHL1Q9NZI5 618 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 ELOVL7A1L3X0 281 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 FADS2P1A8MWK0 482 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 NT5EP21589 574 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 PEX2P28328 305 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 CRHR1P34998 444 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 CASP9P55211 416 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 SF1Q15637 639 aaKnown RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 PHF13Q86YI8 300 aaPredicted RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 NDRG1Q92597 394 aaKnown RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 ASAH2Q9NR71 780 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 DCST1Q5T197 706 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 ECHDC2Q86YB7 292 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 MTMR9Q96QG7 549 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 CD84Q9UIB8 345 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 CABYRO75952 493 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 ITGB1P05556 798 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 CDH12P55289 794 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 PLEKHG4Q58EX7 1191 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 UBAP2Q5T6F2 1119 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 NIPA1Q7RTP0 329 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHD4-210ENST00000544040 TM7SF2O76062 418 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 TARBP2Q15633 366 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 LIN52Q52LA3 116 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 ZNF697Q5TEC3 545 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 PAOXQ6QHF9 649 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 BBS12Q6ZW61 710 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 FAM83AQ86UY5 434 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 MYO19Q96H55 970 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 SLC27A6Q9Y2P4 619 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 SLC5A3P53794 718 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 EIF2S3LQ2VIR3 472 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 PITRM1Q5JRX3 1037 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 CRYBG2Q8N1P7 616 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 PMEPA1Q969W9 287 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 TMEM27Q9HBJ8 222 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 DNAJC28Q9NX36 388 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 RIIAD1A6NNX1 92 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 GCATO75600 419 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 IPO13O94829 963 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 UBA1P22314 1058 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 GNPDA1P46926 289 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 TSPAN5P62079 268 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 ZNF234Q14588 700 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 CLP1Q92989 425 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 ZFP3Q96NJ6 502 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 ACO2Q99798 780 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 SLC6A15Q9H2J7 730 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 DDX4Q9NQI0 724 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 PCDHGA10Q9Y5H3 936 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 CNTNAP4Q9C0A0 1308 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 PRLP01236 227 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 MRPS5P82675 430 aaKnown RBP15.34■□□□□ 0.05
CHD4-210ENST00000544040 ZMIZ2Q8NF64 920 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 HBEGFQ99075 208 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 KCNN2Q9H2S1 579 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 PLEKHA1Q9HB21 404 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 SNTG1Q9NSN8 517 aa15.34■□□□□ 0.05
CHD4-210ENST00000544040 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 NEDD8-MDP1E9PL57 170 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 TEX46H3BTG2 121 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 KMOO15229 486 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 PGLSO95336 258 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 HTR1BP28222 390 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 AQP4P55087 323 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 TPTEP56180 551 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 SP140Q13342 867 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 USP30Q70CQ3 517 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 TAMM41Q96BW9 452 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 NUP50Q9UKX7 468 aa15.33■□□□□ 0.05
CHD4-210ENST00000544040 BTNL10A8MVZ5 291 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 B4GALT5O43286 388 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 CSN2P05814 226 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 MPP1Q00013 466 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 HSPB3Q12988 150 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 IL23RQ5VWK5 629 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 CAPN13Q6MZZ7 669 aaPredicted RBP15.33■□□□□ 0.04
CHD4-210ENST00000544040 C17orf64Q86WR6 236 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 KAZALD1Q96I82 304 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 HSFY1Q96LI6 401 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 DHRS1Q96LJ7 313 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 B3GNT5Q9BYG0 378 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 SRRM3A6NNA2 597 aaPredicted RBP15.33■□□□□ 0.04
CHD4-210ENST00000544040 PAGE1O75459 146 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 C2P06681 752 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 KIR3DL1P43629 444 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 RALGPS1Q5JS13 557 aa15.33■□□□□ 0.04
CHD4-210ENST00000544040 FCRL2Q96LA5 508 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms