RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MICALCLQ6ZW33 695 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 MARK2Q7KZI7 788 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 PDIK1LQ8N165 341 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 NXPE1Q8N323 547 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 SDR16C5Q8N3Y7 309 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 FSTL5Q8N475 847 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 MFSD3Q96ES6 412 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 OR2M4Q96R27 311 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 CARD6Q9BX69 1037 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 CLPBQ9H078 707 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 TMEM168Q9H0V1 697 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 OR2AG1Q9H205 316 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 FAM96AQ9H5X1 160 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 L2HGDHQ9H9P8 463 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 TRNAU1APQ9NX07 287 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 GRHL1Q9NZI5 618 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 CEP250Q9BV73 2442 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 NEMP2A6NFY4 417 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 OR51F1A6NGY5 319 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 CHUKO15111 745 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 SCAMP1O15126 338 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 SH3BP5O60239 455 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 CDK14O94921 469 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 GOT2P00505 430 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 ZNF8P17098 575 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 GRK6P43250 576 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 CDKN1CP49918 316 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 SLC7A5Q01650 507 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 DHX9Q08211 1270 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 TMEM115Q12893 351 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 ELOCQ15369 112 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 HIF1AQ16665 826 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 MSS51Q4VC12 460 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 CES3Q6UWW8 571 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 PIP4P1Q86T03 277 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 TMEM135Q86UB9 458 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 GALNT13Q8IUC8 556 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 NAXDQ8IW45 347 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 PIANPQ8IYJ0 282 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 OR6P1Q8NGX9 317 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 OR4L1Q8NH43 312 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 TTC25Q96NG3 672 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 ZCCHC2Q9C0B9 1178 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 MAD1L1Q9Y6D9 718 aa16.92■□□□□ 0.3
RABGGTA-203ENST00000543002 PLXNB3Q9ULL4 1909 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 LMO7DNF2Z398 122 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 CELA2BP08218 269 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 PRSS56P0CW18 603 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 GIMD1P0DJR0 217 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 ACRV1P26436 265 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 ARL4CP56559 192 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 CBLBQ13191 982 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 GTF2H3Q13889 308 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 BBS9Q3SYG4 887 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 ANKRD20A4Q4UJ75 823 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 GLE1Q53GS7 698 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 KIAA0930Q6ICG6 404 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 PSAPL1Q6NUJ1 521 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 TAS2R42Q7RTR8 314 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 SERPINA9Q86WD7 417 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 SETD7Q8WTS6 366 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 HEXDCQ8WVB3 486 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 SEC14L1Q92503 715 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 LRRC39Q96DD0 335 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 STAMBPL1Q96FJ0 436 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 PWWP2AQ96N64 755 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 COPS8Q99627 209 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 RTKNQ9BST9 563 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 ZDHHC3Q9NYG2 299 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 ZNHIT2Q9UHR6 403 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 BTBD3Q9Y2F9 522 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 GPSM3Q9Y4H4 160 aa16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 PCYT1BQ9Y5K3 369 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-203ENST00000543002 BPTFQ12830 3046 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 DMXL1Q9Y485 3027 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 IGLV3-16A0A075B6K0 115 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 TPP1O14773 563 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 GRID2O43424 1007 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 USP1O94782 785 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 VAPBO95292 243 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 ANXA6P08133 673 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 ALPPL2P10696 532 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 PAMP19021 973 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 MSH3P20585 1137 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 ARNTP27540 789 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 AKT1P31749 480 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 CAV1Q03135 178 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 ILF3Q12906 894 aaKnown RBP eCLIP16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 LVRNQ6Q4G3 990 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 GKN2Q86XP6 184 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 EID2Q8N6I1 236 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 RASGEF1AQ8N9B8 481 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 OR4C6Q8NH72 309 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 CCL4L1Q8NHW4 92 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 GPBAR1Q8TDU6 330 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 RHBDD1Q8TEB9 315 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 ART4Q93070 314 aa16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 ZNF669Q96BR6 464 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-203ENST00000543002 DCUN1D1Q96GG9 259 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms